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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183642964
OQVO01000316
46648
Bacteroidota
TAA
Leu
>WENV183642993
OQVO01000438
56385
Bacteroidota
TGA
Ser
>WENV183643026
OQVO01000649
404109
Bacteroidota
CTC
Glu
>WENV183643064
OQVO01001072
242241
Bacteroidota
GTC
Asp
>WENV183643080
OQVO01001290
481328
Bacteroidota
TTG
Gln
>WENV183643261
OQVO01005618
179697
Bacteroidota
TGT
Thr
>WENV183643351
OQVO01008709
312035
Bacteroidota
CCA
Trp
>WENV183643416
OQVO01012991
175944
Bacteroidota
CAT
Met
>WENV183643419
OQVO01013253
400161
Bacteroidota
GGT
Thr
>WENV183643471
OQVO01018976
170323
Bacteroidota
GGG
Pro
>WENV183643571
OQVO01031729
228511
Bacteroidota
GAT
Ile
>WENV183643667
OQVO01049465
118221
Bacteroidota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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