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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183645677
OQVQ01018702
400161
Bacteroidota
GGT
Thr
>WENV183644962
OQVQ01000295
156422
Bacteroidota
TAC
Val
>WENV183645375
OQVQ01005127
156422
Bacteroidota
TAC
Val
>WENV183645842
OQVQ01033017
201819
Bacteroidota
CAT
Met
>WENV183645446
OQVQ01007239
118221
Bacteroidota
CAA
Leu
>WENV183645508
OQVQ01009579
118221
Bacteroidota
CAA
Leu
>WENV183645368
OQVQ01004944
283316
Bacteroidota
CCA
Trp
>WENV183644868
OQVQ01000113
178571
Bacteroidota
GTT
Asn
>WENV183646047
OQVQ01070025
178907
Bacteroidota
TCT
Arg
>WENV183645229
OQVQ01002170
56385
Bacteroidota
TGA
Ser
>WENV183645318
OQVQ01003799
56385
Bacteroidota
TGA
Ser
>WENV183645180
OQVQ01001482
57645
Bacteroidota
TGA
Ser
>WENV183645632
OQVQ01015076
20449
Bacteroidota
GGA
Ser
>WENV183645799
OQVQ01028686
312035
Bacteroidota
CCA
Trp
>WENV183645996
OQVQ01056519
175944
Bacteroidota
CAT
Met
>WENV183645241
OQVQ01002340
179697
Bacteroidota
TGT
Thr
>WENV183645438
OQVQ01006999
399200
Bacteroidota
CAT
Met
>WENV183644976
OQVQ01000336
404109
Bacteroidota
CTC
Glu
>WENV183645166
OQVQ01001334
404109
Bacteroidota
CTC
Glu
>WENV183645067
OQVQ01000762
46648
Bacteroidota
TAA
Leu
>WENV183645746
OQVQ01023647
280478
Bacteroidota
GCC
Gly
>WENV183645753
OQVQ01023788
284236
Bacteroidota
CGG
Pro
>WENV183645034
OQVQ01000635
187814
Bacteroidota
GTC
Asp
>WENV183645388
OQVQ01005295
178134
Bacteroidota
TGG
Pro
>WENV183645337
OQVQ01004241
158068
Bacteroidota
GGG
Pro
>WENV183644970
OQVQ01000327
481328
Bacteroidota
TTG
Gln
>WENV183645425
OQVQ01006539
481328
Bacteroidota
TTG
Gln
>WENV183644965
OQVQ01000304
284456
Bacteroidota
CGG
Pro
>WENV183645475
OQVQ01008480
481045
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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