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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183647293
OQVS01000227
481044
Bacteroidota
>WENV183647357
OQVS01000395
118221
Bacteroidota
CAA
Leu
>WENV183647822
OQVS01003140
118221
Bacteroidota
CAA
Leu
>WENV183648611
OQVS01021877
118221
Bacteroidota
CAA
Leu
>WENV183648846
OQVS01046594
118221
Bacteroidota
CAA
Leu
>WENV183648275
OQVS01010071
280557
Bacteroidota
CAT
Met
>WENV183647352
OQVS01000366
201819
Bacteroidota
CAT
Met
>WENV183647355
OQVS01000383
201819
Bacteroidota
CAT
Met
>WENV183647426
OQVS01000647
201819
Bacteroidota
CAT
Met
>WENV183647726
OQVS01002231
201819
Bacteroidota
CAT
Met
>WENV183648316
OQVS01011540
201819
Bacteroidota
CAT
Met
>WENV183647474
OQVS01000841
175944
Bacteroidota
CAT
Met
>WENV183647894
OQVS01004018
175944
Bacteroidota
CAT
Met
>WENV183648976
OQVS01068454
312035
Bacteroidota
CCA
Trp
>WENV183647249
OQVS01000137
283315
Bacteroidota
CGT
Thr
>WENV183648947
OQVS01062671
404109
Bacteroidota
CTC
Glu
>WENV183647558
OQVS01001272
488746
Bacteroidota
CTG
Gln
>WENV183648893
OQVS01054181
488746
Bacteroidota
CTG
Gln
>WENV183648418
OQVS01014819
280478
Bacteroidota
GCC
Gly
>WENV183648652
OQVS01024381
178179
Bacteroidota
GGC
Ala
>WENV183647167
OQVS01000002
156128
Bacteroidota
GGG
Pro
>WENV183648864
OQVS01050095
158068
Bacteroidota
GGG
Pro
>WENV183648254
OQVS01009649
400161
Bacteroidota
GGT
Thr
>WENV183647600
OQVS01001550
215303
Bacteroidota
GTC
Asp
>WENV183647693
OQVS01002043
187814
Bacteroidota
GTC
Asp
>WENV183647956
OQVS01004788
187814
Bacteroidota
GTC
Asp
>WENV183647425
OQVS01000643
178571
Bacteroidota
GTT
Asn
>WENV183648615
OQVS01022160
182267
Bacteroidota
GTT
Asn
>WENV183647997
OQVS01005420
56072
Bacteroidota
TAA
Leu
>WENV183647367
OQVS01000468
46648
Bacteroidota
TAA
Leu
>WENV183647554
OQVS01001224
46648
Bacteroidota
TAA
Leu
>WENV183647568
OQVS01001307
46648
Bacteroidota
TAA
Leu
>WENV183647702
OQVS01002075
46648
Bacteroidota
TAA
Leu
>WENV183647995
OQVS01005401
46648
Bacteroidota
TAA
Leu
>WENV183648384
OQVS01013914
118089
Bacteroidota
TAG
Leu
>WENV183648110
OQVS01007197
56493
Bacteroidota
TGA
Ser
>WENV183647901
OQVS01004131
56385
Bacteroidota
TGA
Ser
>WENV183647902
OQVS01004131
56385
Bacteroidota
TGA
Ser
>WENV183648357
OQVS01013429
56385
Bacteroidota
TGA
Ser
>WENV183647900
OQVS01004131
56385
Bacteroidota
TGA
Ser
>WENV183647427
OQVS01000650
178134
Bacteroidota
TGG
Pro
>WENV183647457
OQVS01000771
178134
Bacteroidota
TGG
Pro
>WENV183648632
OQVS01022737
178134
Bacteroidota
TGG
Pro
>WENV183647254
OQVS01000139
191205
Bacteroidota
TGG
Pro
>WENV183648531
OQVS01019037
179697
Bacteroidota
TGT
Thr
>WENV183648734
OQVS01031796
418894
Bacteroidota
TTC
Glu
>WENV183647807
OQVS01003013
481328
Bacteroidota
TTG
Gln
>WENV183647467
OQVS01000815
484496
Bacteroidota
TTG
Gln
>WENV183647424
OQVS01000641
282852
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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