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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183649190
OQVT01000024
156128
Bacteroidota
GGG
Pro
>WENV183649196
OQVT01000040
284236
Bacteroidota
CGG
Pro
>WENV183649253
OQVT01000209
178134
Bacteroidota
TGG
Pro
>WENV183649260
OQVT01000262
191205
Bacteroidota
TGG
Pro
>WENV183649266
OQVT01000282
178571
Bacteroidota
GTT
Asn
>WENV183649317
OQVT01000640
187814
Bacteroidota
GTC
Asp
>WENV183649375
OQVT01000918
191205
Bacteroidota
TGG
Pro
>WENV183649376
OQVT01000918
191205
Bacteroidota
TGG
Pro
>WENV183649423
OQVT01001326
481044
Bacteroidota
>WENV183649492
OQVT01001740
46648
Bacteroidota
TAA
Leu
>WENV183649504
OQVT01001906
56385
Bacteroidota
TGA
Ser
>WENV183649506
OQVT01001917
158068
Bacteroidota
GGG
Pro
>WENV183649528
OQVT01002266
187814
Bacteroidota
GTC
Asp
>WENV183649535
OQVT01002309
56072
Bacteroidota
TAA
Leu
>WENV183649538
OQVT01002323
158068
Bacteroidota
GGG
Pro
>WENV183649559
OQVT01002599
191205
Bacteroidota
TGG
Pro
>WENV183649573
OQVT01002678
118221
Bacteroidota
CAA
Leu
>WENV183649590
OQVT01002939
56385
Bacteroidota
TGA
Ser
>WENV183649592
OQVT01002968
491385
Bacteroidota
TTG
Gln
>WENV183649654
OQVT01003461
282852
Bacteroidota
TTT
Lys
>WENV183649678
OQVT01003722
280557
Bacteroidota
CAT
Met
>WENV183649688
OQVT01003939
178907
Bacteroidota
TCT
Arg
>WENV183649692
OQVT01003993
56493
Bacteroidota
TGA
Ser
>WENV183649720
OQVT01004371
481328
Bacteroidota
TTG
Gln
>WENV183649728
OQVT01004466
178571
Bacteroidota
GTT
Asn
>WENV183649765
OQVT01005092
182267
Bacteroidota
GTT
Asn
>WENV183649776
OQVT01005258
201819
Bacteroidota
CAT
Met
>WENV183649817
OQVT01005691
187400
Bacteroidota
GTT
Asn
>WENV183649846
OQVT01006153
118221
Bacteroidota
CAA
Leu
>WENV183649934
OQVT01007442
46648
Bacteroidota
TAA
Leu
>WENV183649940
OQVT01007604
46648
Bacteroidota
TAA
Leu
>WENV183649980
OQVT01008285
280446
Bacteroidota
TTT
Lys
>WENV183650046
OQVT01009840
46648
Bacteroidota
TAA
Leu
>WENV183650067
OQVT01010359
331443
Bacteroidota
CGT
Thr
>WENV183650084
OQVT01010845
187400
Bacteroidota
GTT
Asn
>WENV183650153
OQVT01012143
56385
Bacteroidota
TGA
Ser
>WENV183650269
OQVT01016008
46648
Bacteroidota
TAA
Leu
>WENV183650470
OQVT01023869
118221
Bacteroidota
CAA
Leu
>WENV183650501
OQVT01025083
118089
Bacteroidota
TAG
Leu
>WENV183650558
OQVT01027906
484496
Bacteroidota
TTG
Gln
>WENV183650614
OQVT01031386
400161
Bacteroidota
GGT
Thr
>WENV183650615
OQVT01031386
283316
Bacteroidota
CCA
Trp
>WENV183650799
OQVT01041801
179697
Bacteroidota
TGT
Thr
>WENV183650814
OQVT01042644
481045
Bacteroidota
CCC
Gly
>WENV183650883
OQVT01048147
283315
Bacteroidota
CGT
Thr
>WENV183650945
OQVT01053014
46648
Bacteroidota
TAA
Leu
>WENV183651050
OQVT01067007
118221
Bacteroidota
CAA
Leu
>WENV183651346
OQVT01133104
280478
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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