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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183659031
OQWM01010600
400161
Bacteroidota
GGT
Thr
>WENV183658026
OQWM01000087
156422
Bacteroidota
TAC
Val
>WENV183658065
OQWM01000197
156422
Bacteroidota
TAC
Val
>WENV183658276
OQWM01001128
156422
Bacteroidota
TAC
Val
>WENV183658648
OQWM01004241
156422
Bacteroidota
TAC
Val
>WENV183658780
OQWM01005953
156422
Bacteroidota
TAC
Val
>WENV183659019
OQWM01010328
156422
Bacteroidota
TAC
Val
>WENV183660072
OQWM01112950
280553
Bacteroidota
TTT
Lys
>WENV183658415
OQWM01002011
118221
Bacteroidota
CAA
Leu
>WENV183658428
OQWM01002158
118221
Bacteroidota
CAA
Leu
>WENV183658928
OQWM01008175
118221
Bacteroidota
CAA
Leu
>WENV183659466
OQWM01026539
118221
Bacteroidota
CAA
Leu
>WENV183659985
OQWM01091865
156068
Bacteroidota
TAC
Val
>WENV183658857
OQWM01007016
178571
Bacteroidota
GTT
Asn
>WENV183658076
OQWM01000213
56385
Bacteroidota
TGA
Ser
>WENV183658187
OQWM01000650
56385
Bacteroidota
TGA
Ser
>WENV183658036
OQWM01000103
175944
Bacteroidota
CAT
Met
>WENV183658809
OQWM01006188
175944
Bacteroidota
CAT
Met
>WENV183658905
OQWM01007798
175944
Bacteroidota
CAT
Met
>WENV183659615
OQWM01038651
179697
Bacteroidota
TGT
Thr
>WENV183658930
OQWM01008201
283315
Bacteroidota
CGT
Thr
>WENV183658109
OQWM01000325
156128
Bacteroidota
GGG
Pro
>WENV183658796
OQWM01006074
280451
Bacteroidota
CGT
Thr
>WENV183658029
OQWM01000093
404109
Bacteroidota
CTC
Glu
>WENV183658122
OQWM01000357
404109
Bacteroidota
CTC
Glu
>WENV183658126
OQWM01000362
404109
Bacteroidota
CTC
Glu
>WENV183658309
OQWM01001365
404109
Bacteroidota
CTC
Glu
>WENV183658960
OQWM01009109
404109
Bacteroidota
CTC
Glu
>WENV183658855
OQWM01006901
189252
Bacteroidota
GGC
Ala
>WENV183659118
OQWM01012983
46648
Bacteroidota
TAA
Leu
>WENV183658311
OQWM01001370
46648
Bacteroidota
TAA
Leu
>WENV183658354
OQWM01001676
46648
Bacteroidota
TAA
Leu
>WENV183658742
OQWM01005440
46648
Bacteroidota
TAA
Leu
>WENV183659604
OQWM01037751
118432
Bacteroidota
CAG
Leu
>WENV183658820
OQWM01006345
187400
Bacteroidota
GTT
Asn
>WENV183658255
OQWM01001015
187814
Bacteroidota
GTC
Asp
>WENV183658430
OQWM01002179
187814
Bacteroidota
GTC
Asp
>WENV183658549
OQWM01003150
187814
Bacteroidota
GTC
Asp
>WENV183658695
OQWM01004823
187814
Bacteroidota
GTC
Asp
>WENV183658736
OQWM01005395
187814
Bacteroidota
GTC
Asp
>WENV183659211
OQWM01015754
187814
Bacteroidota
GTC
Asp
>WENV183658460
OQWM01002405
178134
Bacteroidota
TGG
Pro
>WENV183659273
OQWM01017591
178134
Bacteroidota
TGG
Pro
>WENV183659308
OQWM01018989
118220
Bacteroidota
GTA
Tyr
>WENV183658041
OQWM01000122
481044
Bacteroidota
>WENV183658318
OQWM01001422
191205
Bacteroidota
TGG
Pro
>WENV183658432
OQWM01002216
191205
Bacteroidota
TGG
Pro
>WENV183659559
OQWM01034008
481328
Bacteroidota
TTG
Gln
>WENV183659322
OQWM01019507
56318
Bacteroidota
TGA
Ser
>WENV183659272
OQWM01017591
481045
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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