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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183722733
PDYI01000168
295385
Bacteroidota
CCA
Trp
>WENV183722810
PDYI01000510
117741
Bacteroidota
TAG
Leu
>WENV183722761
PDYI01000227
398829
Bacteroidota
CCT
Arg
>WENV183722726
PDYI01000168
175838
Bacteroidota
GTT
Asn
>WENV183722727
PDYI01000168
175838
Bacteroidota
GTT
Asn
>WENV183722798
PDYI01000482
289031
Bacteroidota
CAT
Met
>WENV183722717
PDYI01000031
280557
Bacteroidota
CAT
Met
>WENV183722773
PDYI01000337
280557
Bacteroidota
CAT
Met
>WENV183722770
PDYI01000336
20206
Bacteroidota
GGA
Ser
>WENV183722707
PDYI01000002
201819
Bacteroidota
CAT
Met
>WENV183722704
PDYI01000001
56493
Bacteroidota
TGA
Ser
>WENV183722705
PDYI01000001
175903
Bacteroidota
GTG
His
>WENV183722782
PDYI01000363
398872
Bacteroidota
GGT
Thr
>WENV183722825
PDYI01000549
175936
Bacteroidota
CAT
Met
>WENV183722721
PDYI01000063
29791
Bacteroidota
GCT
Ser
>WENV183722764
PDYI01000249
56072
Bacteroidota
TAA
Leu
>WENV183722801
PDYI01000503
56072
Bacteroidota
TAA
Leu
>WENV183722738
PDYI01000172
57807
Bacteroidota
TGA
Ser
>WENV183722753
PDYI01000192
57807
Bacteroidota
TGA
Ser
>WENV183722818
PDYI01000532
57807
Bacteroidota
TGA
Ser
>WENV183722842
PDYI01000681
175902
Bacteroidota
GGC
Ala
>WENV183722722
PDYI01000063
398860
Bacteroidota
CTC
Glu
>WENV183722787
PDYI01000374
398860
Bacteroidota
CTC
Glu
>WENV183722750
PDYI01000189
480404
Bacteroidota
TTG
Gln
>WENV183722711
PDYI01000006
280451
Bacteroidota
CGT
Thr
>WENV183722712
PDYI01000023
99847
Bacteroidota
GTA
Tyr
>WENV183722731
PDYI01000168
99847
Bacteroidota
GTA
Tyr
>WENV183722806
PDYI01000505
99847
Bacteroidota
GTA
Tyr
>WENV183722723
PDYI01000067
186874
Bacteroidota
CAT
Met
>WENV183722749
PDYI01000188
332896
Bacteroidota
TTT
Lys
>WENV183722789
PDYI01000418
332896
Bacteroidota
TTT
Lys
>WENV183722769
PDYI01000336
488746
Bacteroidota
CTG
Gln
>WENV183722824
PDYI01000546
399026
Bacteroidota
CCT
Arg
>WENV183722720
PDYI01000062
20766
Bacteroidota
GGA
Ser
>WENV183722747
PDYI01000185
280532
Bacteroidota
>WENV183722762
PDYI01000241
229246
Bacteroidota
GGC
Ala
>WENV183722815
PDYI01000516
480318
Bacteroidota
CTG
Gln
>WENV183722771
PDYI01000336
158068
Bacteroidota
GGG
Pro
>WENV183722814
PDYI01000516
158068
Bacteroidota
GGG
Pro
>WENV183722744
PDYI01000176
398828
Bacteroidota
CCG
Arg
>WENV183722846
PDYI01000686
140771
Bacteroidota
>WENV183722849
PDYI01000686
140771
Bacteroidota
>WENV183722823
PDYI01000544
176192
Bacteroidota
TCT
Arg
>WENV183722725
PDYI01000117
280446
Bacteroidota
TTT
Lys
>WENV183722746
PDYI01000179
280446
Bacteroidota
TTT
Lys
>WENV183722835
PDYI01000671
484496
Bacteroidota
TTG
Gln
>WENV183722758
PDYI01000206
117804
Bacteroidota
TAG
Leu
>WENV183722778
PDYI01000352
398836
Bacteroidota
GCA
Cys
>WENV183722836
PDYI01000676
398836
Bacteroidota
GCA
Cys
>WENV183722830
PDYI01000634
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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