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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183718270
PDWJ01003114
83495
Campylobacterota
TAA
Leu
>WENV183718678
PDWJ01005819
194613
Campylobacterota
CAT
Met
>WENV183718918
PDWJ01007683
323119
Campylobacterota
TAC
Val
>WENV183719435
PDWJ01014112
294047
Campylobacterota
GAA
Phe
>WENV183719436
PDWJ01014112
181213
Campylobacterota
TGT
Thr
>WENV183719437
PDWJ01014112
118741
Campylobacterota
GTA
Tyr
>WENV183719525
PDWJ01015588
83495
Campylobacterota
TAA
Leu
>WENV183719652
PDWJ01017959
181213
Campylobacterota
TGT
Thr
>WENV183719806
PDWJ01020635
156572
Campylobacterota
TGG
Pro
>WENV183719809
PDWJ01020635
118746
Campylobacterota
TAG
Leu
>WENV183720001
PDWJ01024513
194613
Campylobacterota
CAT
Met
>WENV183720277
PDWJ01030692
399077
Campylobacterota
GGT
Thr
>WENV183720282
PDWJ01030843
399160
Campylobacterota
TTC
Glu
>WENV183721025
PDWJ01052683
187625
Campylobacterota
GAT
Ile
>WENV183721028
PDWJ01052698
194613
Campylobacterota
CAT
Met
>WENV183721030
PDWJ01052698
218602
Campylobacterota
CAT
Met
>WENV183721138
PDWJ01056412
323119
Campylobacterota
TAC
Val
>WENV183721139
PDWJ01056412
208017
Campylobacterota
GTC
Asp
>WENV183721140
PDWJ01056424
83495
Campylobacterota
TAA
Leu
>WENV183721238
PDWJ01060381
181213
Campylobacterota
TGT
Thr
>WENV183721572
PDWJ01075748
235736
Campylobacterota
TCG
Arg
>WENV183721573
PDWJ01075748
185133
Campylobacterota
TCT
Arg
>WENV183721732
PDWJ01083259
301770
Campylobacterota
TTT
Lys
>WENV183721734
PDWJ01083259
323119
Campylobacterota
TAC
Val
>WENV183721736
PDWJ01083259
208017
Campylobacterota
GTC
Asp
>WENV183721737
PDWJ01083259
301770
Campylobacterota
TTT
Lys
>WENV183721738
PDWJ01083259
323119
Campylobacterota
TAC
Val
>WENV183722002
PDWJ01099169
118746
Campylobacterota
TAG
Leu
>WENV183722119
PDWJ01106801
83495
Campylobacterota
TAA
Leu
>WENV183722178
PDWJ01110529
176586
Campylobacterota
CAT
Met
>WENV183722305
PDWJ01118590
399160
Campylobacterota
TTC
Glu
>WENV183722414
PDWJ01126922
83495
Campylobacterota
TAA
Leu
>WENV183722614
PDWJ01143325
156572
Campylobacterota
TGG
Pro
>WENV183722617
PDWJ01143325
118746
Campylobacterota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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