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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170254910
CEQW01035098
208578
Cyanobacteriota
CGG
Pro
>WENV170254719
CEQW01015828
73534
Cyanobacteriota
CAG
Leu
>WENV170254656
CEQW01012958
195553
Cyanobacteriota
GGG
Pro
>WENV170255044
CEQW01047815
283430
Cyanobacteriota
CCA
Trp
>WENV170254662
CEQW01013503
400473
Cyanobacteriota
GAC
Val
>WENV170254921
CEQW01035604
414584
Cyanobacteriota
GAC
Val
>WENV170254495
CEQW01002772
14711
Cyanobacteriota
GCT
Ser
>WENV170254552
CEQW01006237
292138
Cyanobacteriota
CCA
Trp
>WENV170255038
CEQW01047158
401929
Cyanobacteriota
TTG
Gln
>WENV170254650
CEQW01012711
283431
Cyanobacteriota
GTG
His
>WENV170254749
CEQW01018869
283431
Cyanobacteriota
GTG
His
>WENV170254691
CEQW01014435
118688
Cyanobacteriota
TAG
Leu
>WENV170254803
CEQW01023343
400477
Cyanobacteriota
GTT
Asn
>WENV170254665
CEQW01013639
178673
Cyanobacteriota
CCG
Arg
>WENV170254993
CEQW01043331
178673
Cyanobacteriota
CCG
Arg
>WENV170255115
CEQW01053062
177076
Cyanobacteriota
GTC
Asp
>WENV170255145
CEQW01055128
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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