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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170290889
CESA01063282
299323
Cyanobacteriota
CAT
Met
>WENV170290357
CESA01009283
401920
Cyanobacteriota
TTG
Gln
>WENV170291570
CESA01142279
195553
Cyanobacteriota
GGG
Pro
>WENV170290750
CESA01049052
400473
Cyanobacteriota
GAC
Val
>WENV170290913
CESA01065208
400473
Cyanobacteriota
GAC
Val
>WENV170290607
CESA01032313
414584
Cyanobacteriota
GAC
Val
>WENV170290883
CESA01062833
401917
Cyanobacteriota
GTT
Asn
>WENV170291431
CESA01128184
285296
Cyanobacteriota
GAA
Phe
>WENV170290907
CESA01064670
212126
Cyanobacteriota
GTC
Asp
>WENV170291190
CESA01097168
212126
Cyanobacteriota
GTC
Asp
>WENV170291116
CESA01088643
30082
Cyanobacteriota
TGA
Ser
>WENV170290445
CESA01017460
30082
Cyanobacteriota
TGA
Ser
>WENV170291513
CESA01137399
29722
Cyanobacteriota
CGA
Ser
>WENV170290971
CESA01071092
401929
Cyanobacteriota
TTG
Gln
>WENV170290287
CESA01003834
46946
Cyanobacteriota
TAA
Leu
>WENV170290977
CESA01071403
46946
Cyanobacteriota
TAA
Leu
>WENV170290909
CESA01064670
287207
Cyanobacteriota
CAT
Met
>WENV170291071
CESA01083265
283431
Cyanobacteriota
GTG
His
>WENV170291197
CESA01097903
283431
Cyanobacteriota
GTG
His
>WENV170291314
CESA01113999
410287
Cyanobacteriota
CCC
Gly
>WENV170291404
CESA01125232
286011
Cyanobacteriota
GGC
Ala
>WENV170291475
CESA01133292
400477
Cyanobacteriota
GTT
Asn
>WENV170291468
CESA01132494
178673
Cyanobacteriota
CCG
Arg
>WENV170291607
CESA01145202
402234
Cyanobacteriota
TAC
Val
>WENV170291436
CESA01129038
177220
Cyanobacteriota
CAT
Met
>WENV170290330
CESA01007748
29432
Cyanobacteriota
GGA
Ser
>WENV170290773
CESA01051809
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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