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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318624
CESQ01063418
299323
Cyanobacteriota
CAT
Met
>WENV170318862
CESQ01087073
299323
Cyanobacteriota
CAT
Met
>WENV170319265
CESQ01134060
208578
Cyanobacteriota
CGG
Pro
>WENV170318126
CESQ01017142
195553
Cyanobacteriota
GGG
Pro
>WENV170318269
CESQ01026750
195553
Cyanobacteriota
GGG
Pro
>WENV170318449
CESQ01044707
195553
Cyanobacteriota
GGG
Pro
>WENV170319205
CESQ01127697
195553
Cyanobacteriota
GGG
Pro
>WENV170319464
CESQ01160098
195553
Cyanobacteriota
GGG
Pro
>WENV170319206
CESQ01127799
282452
Cyanobacteriota
GGC
Ala
>WENV170318329
CESQ01032749
285848
Cyanobacteriota
CAT
Met
>WENV170318098
CESQ01014670
14711
Cyanobacteriota
GCT
Ser
>WENV170318014
CESQ01008151
292138
Cyanobacteriota
CCA
Trp
>WENV170320581
CESQ01432246
228486
Cyanobacteriota
GTC
Asp
>WENV170319350
CESQ01144823
343795
Cyanobacteriota
GGC
Ala
>WENV170319684
CESQ01190148
343795
Cyanobacteriota
GGC
Ala
>WENV170318345
CESQ01034896
283431
Cyanobacteriota
GTG
His
>WENV170318456
CESQ01045236
118688
Cyanobacteriota
TAG
Leu
>WENV170319001
CESQ01104932
73307
Cyanobacteriota
CAG
Leu
>WENV170319486
CESQ01163521
177220
Cyanobacteriota
CAT
Met
>WENV170319599
CESQ01179782
177220
Cyanobacteriota
CAT
Met
>WENV170317986
CESQ01006427
185579
Cyanobacteriota
CAT
Met
>WENV170318864
CESQ01087439
185579
Cyanobacteriota
CAT
Met
>WENV170318999
CESQ01104796
185579
Cyanobacteriota
CAT
Met
>WENV170319309
CESQ01139556
185579
Cyanobacteriota
CAT
Met
>WENV170319338
CESQ01142519
185579
Cyanobacteriota
CAT
Met
>WENV170319957
CESQ01216036
185579
Cyanobacteriota
CAT
Met
>WENV170319158
CESQ01122802
177076
Cyanobacteriota
GTC
Asp
>WENV170319161
CESQ01123383
177076
Cyanobacteriota
GTC
Asp
>WENV170319430
CESQ01154645
177076
Cyanobacteriota
GTC
Asp
>WENV170319501
CESQ01165522
177076
Cyanobacteriota
GTC
Asp
>WENV170318919
CESQ01093342
176367
Cyanobacteriota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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