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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170342457
CETD01126228
208578
Cyanobacteriota
CGG
Pro
>WENV170341740
CETD01035924
326453
Cyanobacteriota
CGC
Ala
>WENV170342734
CETD01172338
326453
Cyanobacteriota
CGC
Ala
>WENV170342281
CETD01099776
30885
Cyanobacteriota
GGA
Ser
>WENV170342187
CETD01087143
195553
Cyanobacteriota
GGG
Pro
>WENV170342522
CETD01137553
195553
Cyanobacteriota
GGG
Pro
>WENV170341767
CETD01038185
118720
Cyanobacteriota
CAA
Leu
>WENV170342327
CETD01107111
400473
Cyanobacteriota
GAC
Val
>WENV170342422
CETD01121313
414584
Cyanobacteriota
GAC
Val
>WENV170341763
CETD01037816
410287
Cyanobacteriota
CCC
Gly
>WENV170341374
CETD01000036
118688
Cyanobacteriota
TAG
Leu
>WENV170342527
CETD01138175
118688
Cyanobacteriota
TAG
Leu
>WENV170341432
CETD01007654
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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