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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170362703
CETM01093477
453054
Cyanobacteriota
GAC
Val
>WENV170362882
CETM01108076
453054
Cyanobacteriota
GAC
Val
>WENV170362938
CETM01112356
453054
Cyanobacteriota
GAC
Val
>WENV170363238
CETM01140203
453054
Cyanobacteriota
GAC
Val
>WENV170363406
CETM01156994
208578
Cyanobacteriota
CGG
Pro
>WENV170362819
CETM01102589
195553
Cyanobacteriota
GGG
Pro
>WENV170362795
CETM01100875
283430
Cyanobacteriota
CCA
Trp
>WENV170363753
CETM01185178
283430
Cyanobacteriota
CCA
Trp
>WENV170361812
CETM01029571
118720
Cyanobacteriota
CAA
Leu
>WENV170361356
CETM01003572
14711
Cyanobacteriota
GCT
Ser
>WENV170362747
CETM01097595
185359
Cyanobacteriota
TCT
Arg
>WENV170362124
CETM01048239
228486
Cyanobacteriota
GTC
Asp
>WENV170363820
CETM01190207
401929
Cyanobacteriota
TTG
Gln
>WENV170362990
CETM01117225
343795
Cyanobacteriota
GGC
Ala
>WENV170363774
CETM01186155
343795
Cyanobacteriota
GGC
Ala
>WENV170363814
CETM01189625
16506
Cyanobacteriota
GCT
Ser
>WENV170364199
CETM01204086
283431
Cyanobacteriota
GTG
His
>WENV170361303
CETM01000876
283431
Cyanobacteriota
GTG
His
>WENV170362757
CETM01098241
283431
Cyanobacteriota
GTG
His
>WENV170363979
CETM01197536
283431
Cyanobacteriota
GTG
His
>WENV170364078
CETM01201267
283431
Cyanobacteriota
GTG
His
>WENV170362556
CETM01080825
410287
Cyanobacteriota
CCC
Gly
>WENV170362635
CETM01087253
410287
Cyanobacteriota
CCC
Gly
>WENV170363976
CETM01197422
178673
Cyanobacteriota
CCG
Arg
>WENV170362875
CETM01107457
177220
Cyanobacteriota
CAT
Met
>WENV170362646
CETM01088152
185579
Cyanobacteriota
CAT
Met
>WENV170363264
CETM01143642
185579
Cyanobacteriota
CAT
Met
>WENV170361857
CETM01031016
177076
Cyanobacteriota
GTC
Asp
>WENV170362290
CETM01060254
177076
Cyanobacteriota
GTC
Asp
>WENV170362702
CETM01093383
177076
Cyanobacteriota
GTC
Asp
>WENV170362796
CETM01100875
177076
Cyanobacteriota
GTC
Asp
>WENV170363361
CETM01153155
177076
Cyanobacteriota
GTC
Asp
>WENV170363606
CETM01173036
177076
Cyanobacteriota
GTC
Asp
>WENV170363800
CETM01188422
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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