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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170368376
CETQ01049883
326453
Cyanobacteriota
CGC
Ala
>WENV170368952
CETQ01131216
326453
Cyanobacteriota
CGC
Ala
>WENV170368532
CETQ01070081
73534
Cyanobacteriota
CAG
Leu
>WENV170368508
CETQ01066814
195553
Cyanobacteriota
GGG
Pro
>WENV170368051
CETQ01007843
221462
Cyanobacteriota
CCT
Arg
>WENV170368371
CETQ01048477
118720
Cyanobacteriota
CAA
Leu
>WENV170368361
CETQ01045936
400473
Cyanobacteriota
GAC
Val
>WENV170368174
CETQ01020550
414584
Cyanobacteriota
GAC
Val
>WENV170368154
CETQ01018741
343795
Cyanobacteriota
GGC
Ala
>WENV170369014
CETQ01136114
283431
Cyanobacteriota
GTG
His
>WENV170368007
CETQ01003039
410287
Cyanobacteriota
CCC
Gly
>WENV170368791
CETQ01110653
118688
Cyanobacteriota
TAG
Leu
>WENV170368662
CETQ01087288
178673
Cyanobacteriota
CCG
Arg
>WENV170368605
CETQ01080192
177220
Cyanobacteriota
CAT
Met
>WENV170368511
CETQ01067304
219114
Cyanobacteriota
GGG
Pro
>WENV170368162
CETQ01019423
399503
Cyanobacteriota
GTT
Asn
>WENV170368570
CETQ01076591
399503
Cyanobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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