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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170389311
CEUA01004199
299323
Cyanobacteriota
CAT
Met
>WENV170389416
CEUA01012852
185579
Cyanobacteriota
CAT
Met
>WENV170389590
CEUA01028229
185579
Cyanobacteriota
CAT
Met
>WENV170389665
CEUA01033778
400477
Cyanobacteriota
GTT
Asn
>WENV170389878
CEUA01051226
410287
Cyanobacteriota
CCC
Gly
>WENV170390026
CEUA01065163
282452
Cyanobacteriota
GGC
Ala
>WENV170390119
CEUA01076070
185579
Cyanobacteriota
CAT
Met
>WENV170390137
CEUA01077839
343795
Cyanobacteriota
GGC
Ala
>WENV170390155
CEUA01079681
185579
Cyanobacteriota
CAT
Met
>WENV170390505
CEUA01119144
185579
Cyanobacteriota
CAT
Met
>WENV170390559
CEUA01125034
185579
Cyanobacteriota
CAT
Met
>WENV170390645
CEUA01136136
343795
Cyanobacteriota
GGC
Ala
>WENV170390665
CEUA01139980
282452
Cyanobacteriota
GGC
Ala
>WENV170390881
CEUA01171524
410287
Cyanobacteriota
CCC
Gly
>WENV170390923
CEUA01177028
185579
Cyanobacteriota
CAT
Met
>WENV170390957
CEUA01181775
185579
Cyanobacteriota
CAT
Met
>WENV170391124
CEUA01202993
343795
Cyanobacteriota
GGC
Ala
>WENV170391332
CEUA01222985
195553
Cyanobacteriota
GGG
Pro
>WENV170391663
CEUA01295022
177220
Cyanobacteriota
CAT
Met
>WENV170391681
CEUA01303413
410287
Cyanobacteriota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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