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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170399259
CEUE01003303
118688
Cyanobacteriota
TAG
Leu
>WENV170399263
CEUE01003863
291400
Cyanobacteriota
GTG
His
>WENV170399296
CEUE01007104
178673
Cyanobacteriota
CCG
Arg
>WENV170399371
CEUE01010385
118688
Cyanobacteriota
TAG
Leu
>WENV170399612
CEUE01029229
401929
Cyanobacteriota
TTG
Gln
>WENV170400136
CEUE01077989
326453
Cyanobacteriota
CGC
Ala
>WENV170400365
CEUE01100586
291400
Cyanobacteriota
GTG
His
>WENV170400540
CEUE01120229
299323
Cyanobacteriota
CAT
Met
>WENV170400625
CEUE01130390
292138
Cyanobacteriota
CCA
Trp
>WENV170400932
CEUE01165583
343795
Cyanobacteriota
GGC
Ala
>WENV170401019
CEUE01176651
178673
Cyanobacteriota
CCG
Arg
>WENV170401103
CEUE01185327
291400
Cyanobacteriota
GTG
His
>WENV170401327
CEUE01218224
410287
Cyanobacteriota
CCC
Gly
>WENV170401727
CEUE01267931
178673
Cyanobacteriota
CCG
Arg
>WENV170401770
CEUE01272457
292138
Cyanobacteriota
CCA
Trp
>WENV170401771
CEUE01272457
228486
Cyanobacteriota
GTC
Asp
>WENV170402115
CEUE01298439
400477
Cyanobacteriota
GTT
Asn
>WENV170402587
CEUE01512818
399503
Cyanobacteriota
GTT
Asn
>WENV170402594
CEUE01517988
400473
Cyanobacteriota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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