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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170493811
CEVR01031431
118720
Cyanobacteriota
CAA
Leu
>WENV170493767
CEVR01027814
299323
Cyanobacteriota
CAT
Met
>WENV170494493
CEVR01095501
177220
Cyanobacteriota
CAT
Met
>WENV170494673
CEVR01114784
177220
Cyanobacteriota
CAT
Met
>WENV170495228
CEVR01169477
185579
Cyanobacteriota
CAT
Met
>WENV170494815
CEVR01131287
410287
Cyanobacteriota
CCC
Gly
>WENV170495196
CEVR01167590
185187
Cyanobacteriota
CCG
Arg
>WENV170494513
CEVR01097133
14711
Cyanobacteriota
GCT
Ser
>WENV170494523
CEVR01098500
14711
Cyanobacteriota
GCT
Ser
>WENV170494401
CEVR01083134
30885
Cyanobacteriota
GGA
Ser
>WENV170493470
CEVR01004441
195553
Cyanobacteriota
GGG
Pro
>WENV170494661
CEVR01113468
177076
Cyanobacteriota
GTC
Asp
>WENV170493553
CEVR01011149
177076
Cyanobacteriota
GTC
Asp
>WENV170493568
CEVR01013402
177076
Cyanobacteriota
GTC
Asp
>WENV170494393
CEVR01082591
177076
Cyanobacteriota
GTC
Asp
>WENV170495732
CEVR01349458
291400
Cyanobacteriota
GTG
His
>WENV170494803
CEVR01130104
400477
Cyanobacteriota
GTT
Asn
>WENV170493853
CEVR01034360
399503
Cyanobacteriota
GTT
Asn
>WENV170493598
CEVR01015629
30082
Cyanobacteriota
TGA
Ser
>WENV170494026
CEVR01047662
400475
Cyanobacteriota
TGT
Thr
>WENV170494602
CEVR01107442
400475
Cyanobacteriota
TGT
Thr
>WENV170494728
CEVR01120679
400475
Cyanobacteriota
TGT
Thr
>WENV170494736
CEVR01122040
400475
Cyanobacteriota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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