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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170517962
CEWE01073955
453054
Cyanobacteriota
GAC
Val
>WENV170518781
CEWE01162475
453054
Cyanobacteriota
GAC
Val
>WENV170519631
CEWE01249595
118720
Cyanobacteriota
CAA
Leu
>WENV170519384
CEWE01231783
29722
Cyanobacteriota
CGA
Ser
>WENV170517811
CEWE01063378
401929
Cyanobacteriota
TTG
Gln
>WENV170517500
CEWE01040303
283431
Cyanobacteriota
GTG
His
>WENV170518150
CEWE01093180
283431
Cyanobacteriota
GTG
His
>WENV170518541
CEWE01136199
283431
Cyanobacteriota
GTG
His
>WENV170518072
CEWE01086077
118688
Cyanobacteriota
TAG
Leu
>WENV170518698
CEWE01154410
118688
Cyanobacteriota
TAG
Leu
>WENV170518801
CEWE01164045
118688
Cyanobacteriota
TAG
Leu
>WENV170518974
CEWE01187166
118688
Cyanobacteriota
TAG
Leu
>WENV170517787
CEWE01061405
177220
Cyanobacteriota
CAT
Met
>WENV170519093
CEWE01202992
177220
Cyanobacteriota
CAT
Met
>WENV170518202
CEWE01100561
219114
Cyanobacteriota
GGG
Pro
>WENV170518712
CEWE01155181
219114
Cyanobacteriota
GGG
Pro
>WENV170519336
CEWE01227679
219114
Cyanobacteriota
GGG
Pro
>WENV170518345
CEWE01116538
177076
Cyanobacteriota
GTC
Asp
>WENV170519355
CEWE01228918
177076
Cyanobacteriota
GTC
Asp
>WENV170517085
CEWE01008602
399503
Cyanobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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