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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170521352
CEWG01003042
453054
Cyanobacteriota
GAC
Val
>WENV170521380
CEWG01005070
178673
Cyanobacteriota
CCG
Arg
>WENV170521608
CEWG01023173
73307
Cyanobacteriota
CAG
Leu
>WENV170521716
CEWG01030891
73534
Cyanobacteriota
CAG
Leu
>WENV170521719
CEWG01031066
118688
Cyanobacteriota
TAG
Leu
>WENV170521828
CEWG01039925
176367
Cyanobacteriota
GGG
Pro
>WENV170521929
CEWG01048505
283431
Cyanobacteriota
GTG
His
>WENV170521986
CEWG01055957
118688
Cyanobacteriota
TAG
Leu
>WENV170521988
CEWG01055964
16506
Cyanobacteriota
GCT
Ser
>WENV170522046
CEWG01061954
283431
Cyanobacteriota
GTG
His
>WENV170522079
CEWG01064629
219114
Cyanobacteriota
GGG
Pro
>WENV170522274
CEWG01082224
219114
Cyanobacteriota
GGG
Pro
>WENV170522396
CEWG01092773
453054
Cyanobacteriota
GAC
Val
>WENV170522565
CEWG01109833
30082
Cyanobacteriota
TGA
Ser
>WENV170522623
CEWG01114555
283431
Cyanobacteriota
GTG
His
>WENV170522633
CEWG01115745
399503
Cyanobacteriota
GTT
Asn
>WENV170522695
CEWG01122741
178673
Cyanobacteriota
CCG
Arg
>WENV170522745
CEWG01127968
228486
Cyanobacteriota
GTC
Asp
>WENV170522805
CEWG01133372
283430
Cyanobacteriota
CCA
Trp
>WENV170522860
CEWG01137334
219114
Cyanobacteriota
GGG
Pro
>WENV170522959
CEWG01148807
185187
Cyanobacteriota
CCG
Arg
>WENV170523111
CEWG01168635
283430
Cyanobacteriota
CCA
Trp
>WENV170523148
CEWG01175432
177220
Cyanobacteriota
CAT
Met
>WENV170523170
CEWG01178091
177076
Cyanobacteriota
GTC
Asp
>WENV170523235
CEWG01184364
178673
Cyanobacteriota
CCG
Arg
>WENV170523324
CEWG01194459
400477
Cyanobacteriota
GTT
Asn
>WENV170523502
CEWG01212429
176367
Cyanobacteriota
GGG
Pro
>WENV170523503
CEWG01212605
285848
Cyanobacteriota
CAT
Met
>WENV170523607
CEWG01219783
343795
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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