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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011325
FLSK01001440
141145
Fusobacteriota
>WENV180012220
FLSK01276230
183772
Fusobacteriota
ACG
Arg
>WENV180012349
FLSK01376550
183772
Fusobacteriota
ACG
Arg
>WENV180012350
FLSK01376550
74687
Fusobacteriota
CAA
Leu
>WENV180012221
FLSK01276230
74687
Fusobacteriota
CAA
Leu
>WENV180011323
FLSK01001440
156979
Fusobacteriota
CAT
Met
>WENV180011319
FLSK01001440
214188
Fusobacteriota
CAT
Met
>WENV180011473
FLSK01003109
192090
Fusobacteriota
CAT
Met
>WENV180011811
FLSK01049058
192090
Fusobacteriota
CAT
Met
>WENV180011917
FLSK01093126
183773
Fusobacteriota
CCT
Arg
>WENV180011804
FLSK01049058
288880
Fusobacteriota
CTT
Lys
>WENV180011802
FLSK01049058
484173
Fusobacteriota
GCA
Cys
>WENV180011733
FLSK01030611
47168
Fusobacteriota
GCT
Ser
>WENV180012113
FLSK01190693
119283
Fusobacteriota
GTA
Tyr
>WENV180011329
FLSK01001440
187804
Fusobacteriota
GTC
Asp
>WENV180011800
FLSK01049058
187804
Fusobacteriota
GTC
Asp
>WENV180011807
FLSK01049058
187804
Fusobacteriota
GTC
Asp
>WENV180012099
FLSK01184475
187804
Fusobacteriota
GTC
Asp
>WENV180012330
FLSK01374353
358658
Fusobacteriota
GTG
His
>WENV180011287
FLSK01001054
288877
Fusobacteriota
GTT
Asn
>WENV180012287
FLSK01330152
288877
Fusobacteriota
GTT
Asn
>WENV180011318
FLSK01001440
57899
Fusobacteriota
TAA
Leu
>WENV180011327
FLSK01001440
288879
Fusobacteriota
TAC
Val
>WENV180011328
FLSK01001440
288879
Fusobacteriota
TAC
Val
>WENV180011806
FLSK01049058
288879
Fusobacteriota
TAC
Val
>WENV180012098
FLSK01184475
288879
Fusobacteriota
TAC
Val
>WENV180012268
FLSK01316022
288879
Fusobacteriota
TAC
Val
>WENV180011809
FLSK01049058
143640
Fusobacteriota
TAG
Leu
>WENV180012017
FLSK01132065
187240
Fusobacteriota
TCG
Arg
>WENV180011322
FLSK01001440
183769
Fusobacteriota
TCT
Arg
>WENV180011810
FLSK01049058
183767
Fusobacteriota
TGC
Ala
>WENV180011833
FLSK01056754
203913
Fusobacteriota
TGG
Pro
>WENV180012223
FLSK01278287
202720
Fusobacteriota
TGG
Pro
>WENV180012263
FLSK01309920
202720
Fusobacteriota
TGG
Pro
>WENV180012328
FLSK01373930
202720
Fusobacteriota
TGG
Pro
>WENV180011808
FLSK01049058
288878
Fusobacteriota
TGT
Thr
>WENV180012111
FLSK01190693
288878
Fusobacteriota
TGT
Thr
>WENV180011324
FLSK01001440
407549
Fusobacteriota
TTC
Glu
>WENV180011805
FLSK01049058
407549
Fusobacteriota
TTC
Glu
>WENV180012112
FLSK01190693
407549
Fusobacteriota
TTC
Glu
>WENV180011501
FLSK01003170
464812
Fusobacteriota
TTG
Gln
>WENV180011512
FLSK01003199
464812
Fusobacteriota
TTG
Gln
>WENV180011834
FLSK01056754
464812
Fusobacteriota
TTG
Gln
>WENV180011664
FLSK01016847
404073
Fusobacteriota
TTG
Gln
>WENV180011321
FLSK01001440
280538
Fusobacteriota
TTT
Lys
>WENV180012331
FLSK01374353
280538
Fusobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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