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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183709065
PDWI01023447
141145
Fusobacteriota
>WENV183715729
PDWI01259482
141145
Fusobacteriota
>WENV183706587
PDWI01004762
289706
Fusobacteriota
GTG
His
>WENV183708999
PDWI01022571
289706
Fusobacteriota
GTG
His
>WENV183711933
PDWI01084231
289706
Fusobacteriota
GTG
His
>WENV183706588
PDWI01004762
280538
Fusobacteriota
TTT
Lys
>WENV183709000
PDWI01022571
280538
Fusobacteriota
TTT
Lys
>WENV183711934
PDWI01084231
280538
Fusobacteriota
TTT
Lys
>WENV183709948
PDWI01036924
184485
Fusobacteriota
GTC
Asp
>WENV183707368
PDWI01008070
183767
Fusobacteriota
TGC
Ala
>WENV183708995
PDWI01022530
183767
Fusobacteriota
TGC
Ala
>WENV183712629
PDWI01107614
183767
Fusobacteriota
TGC
Ala
>WENV183713916
PDWI01159157
183767
Fusobacteriota
TGC
Ala
>WENV183714197
PDWI01173131
183767
Fusobacteriota
TGC
Ala
>WENV183712946
PDWI01119743
156979
Fusobacteriota
CAT
Met
>WENV183715727
PDWI01259482
156979
Fusobacteriota
CAT
Met
>WENV183707379
PDWI01008157
288877
Fusobacteriota
GTT
Asn
>WENV183714323
PDWI01177740
288877
Fusobacteriota
GTT
Asn
>WENV183714413
PDWI01182760
288877
Fusobacteriota
GTT
Asn
>WENV183709739
PDWI01032873
119440
Fusobacteriota
GTA
Tyr
>WENV183714972
PDWI01214122
119440
Fusobacteriota
GTA
Tyr
>WENV183709737
PDWI01032873
288878
Fusobacteriota
TGT
Thr
>WENV183714195
PDWI01173131
288878
Fusobacteriota
TGT
Thr
>WENV183714970
PDWI01214122
288878
Fusobacteriota
TGT
Thr
>WENV183709949
PDWI01036924
289708
Fusobacteriota
TGT
Thr
>WENV183711817
PDWI01081344
289708
Fusobacteriota
TGT
Thr
>WENV183715143
PDWI01223689
289708
Fusobacteriota
TGT
Thr
>WENV183712945
PDWI01119743
183769
Fusobacteriota
TCT
Arg
>WENV183709947
PDWI01036924
289709
Fusobacteriota
TAC
Val
>WENV183710754
PDWI01052897
289709
Fusobacteriota
TAC
Val
>WENV183711708
PDWI01077445
289709
Fusobacteriota
TAC
Val
>WENV183714359
PDWI01179780
289709
Fusobacteriota
TAC
Val
>WENV183706589
PDWI01004762
141384
Fusobacteriota
TAG
Leu
>WENV183709001
PDWI01022571
141384
Fusobacteriota
TAG
Leu
>WENV183714196
PDWI01173131
141384
Fusobacteriota
TAG
Leu
>WENV183709067
PDWI01023447
295075
Fusobacteriota
TAC
Val
>WENV183710227
PDWI01041874
295075
Fusobacteriota
TAC
Val
>WENV183712948
PDWI01119743
295075
Fusobacteriota
TAC
Val
>WENV183713056
PDWI01122836
295075
Fusobacteriota
TAC
Val
>WENV183714918
PDWI01211338
295075
Fusobacteriota
TAC
Val
>WENV183715731
PDWI01259482
295075
Fusobacteriota
TAC
Val
>WENV183706591
PDWI01004762
57087
Fusobacteriota
TAA
Leu
>WENV183712942
PDWI01119743
57087
Fusobacteriota
TAA
Leu
>WENV183714716
PDWI01199508
57087
Fusobacteriota
TAA
Leu
>WENV183712064
PDWI01087615
192090
Fusobacteriota
CAT
Met
>WENV183711931
PDWI01084231
183766
Fusobacteriota
TGG
Pro
>WENV183715923
PDWI01274136
183766
Fusobacteriota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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