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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015574
AZIH01005443
73123
Gammaproteobacteria
CAA
Leu
>WENV170015495
AZIH01000734
214256
Gammaproteobacteria
GGG
Pro
>WENV170015543
AZIH01003849
20273
Gammaproteobacteria
TGA
Ser
>WENV170015598
AZIH01009299
20273
Gammaproteobacteria
TGA
Ser
>WENV170015606
AZIH01010916
314350
Gammaproteobacteria
CCA
Trp
>WENV170015628
AZIH01012673
180053
Gammaproteobacteria
CAT
Met
>WENV170015588
AZIH01007191
120827
Gammaproteobacteria
GAG
Leu
>WENV170015557
AZIH01004921
290068
Gammaproteobacteria
TTT
Lys
>WENV170015506
AZIH01001793
229289
Gammaproteobacteria
TGG
Pro
>WENV170015541
AZIH01003609
281282
Gammaproteobacteria
TTC
Glu
>WENV170015550
AZIH01004369
281282
Gammaproteobacteria
TTC
Glu
>WENV170015572
AZIH01005442
281282
Gammaproteobacteria
TTC
Glu
>WENV170015554
AZIH01004617
329164
Gammaproteobacteria
TTT
Lys
>WENV170015555
AZIH01004617
329164
Gammaproteobacteria
TTT
Lys
>WENV170015526
AZIH01002957
176663
Gammaproteobacteria
GGG
Pro
>WENV170015570
AZIH01005380
317782
Gammaproteobacteria
TAC
Val
>WENV170015502
AZIH01001422
480516
Gammaproteobacteria
GCA
Cys
>WENV170015514
AZIH01002312
480516
Gammaproteobacteria
GCA
Cys
>WENV170015535
AZIH01003474
338424
Gammaproteobacteria
TAC
Val
>WENV170015537
AZIH01003474
338424
Gammaproteobacteria
TAC
Val
>WENV170015592
AZIH01008594
280812
Gammaproteobacteria
GAA
Phe
>WENV170015595
AZIH01008938
280812
Gammaproteobacteria
GAA
Phe
>WENV170015553
AZIH01004615
176661
Gammaproteobacteria
GAC
Val
>WENV170015596
AZIH01008978
178169
Gammaproteobacteria
GAC
Val
>WENV170015529
AZIH01003071
188798
Gammaproteobacteria
ACG
Arg
>WENV170015530
AZIH01003071
188798
Gammaproteobacteria
ACG
Arg
>WENV170015501
AZIH01001422
306288
Gammaproteobacteria
GCC
Gly
>WENV170015513
AZIH01002312
306288
Gammaproteobacteria
GCC
Gly
>WENV170015573
AZIH01005442
306288
Gammaproteobacteria
GCC
Gly
>WENV170015497
AZIH01001364
335783
Gammaproteobacteria
GTT
Asn
>WENV170015584
AZIH01006525
176664
Gammaproteobacteria
CCT
Arg
>WENV170015559
AZIH01005104
334421
Gammaproteobacteria
TGT
Thr
>WENV170015562
AZIH01005104
421507
Gammaproteobacteria
GGT
Thr
>WENV170015561
AZIH01005104
402011
Gammaproteobacteria
TCC
Gly
>WENV170015508
AZIH01001793
281283
Gammaproteobacteria
GTG
His
>WENV170015484
AZIH01000062
221659
Gammaproteobacteria
CAT
Met
>WENV170015587
AZIH01007064
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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