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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170208506
CEPV01001608
176301
Gammaproteobacteria
GAT
Ile
>WENV170208524
CEPV01002431
183701
Gammaproteobacteria
GAT
Ile
>WENV170208606
CEPV01006219
176301
Gammaproteobacteria
GAT
Ile
>WENV170208607
CEPV01006219
292006
Gammaproteobacteria
TGC
Ala
>WENV170208617
CEPV01006961
13452
Gammaproteobacteria
GCT
Ser
>WENV170208618
CEPV01006961
232119
Gammaproteobacteria
ACG
Arg
>WENV170208798
CEPV01015838
282683
Gammaproteobacteria
GGC
Ala
>WENV170209148
CEPV01036472
176301
Gammaproteobacteria
GAT
Ile
>WENV170209225
CEPV01042319
118371
Gammaproteobacteria
CAA
Leu
>WENV170209294
CEPV01047619
329164
Gammaproteobacteria
TTT
Lys
>WENV170209326
CEPV01049297
401684
Gammaproteobacteria
CCT
Arg
>WENV170209343
CEPV01050587
297858
Gammaproteobacteria
TGC
Ala
>WENV170209488
CEPV01063103
296672
Gammaproteobacteria
GGT
Thr
>WENV170209565
CEPV01070026
8635
Gammaproteobacteria
GCT
Ser
>WENV170209671
CEPV01078930
176545
Gammaproteobacteria
CAT
Met
>WENV170209679
CEPV01079532
208313
Gammaproteobacteria
GAC
Val
>WENV170209860
CEPV01090127
180679
Gammaproteobacteria
CCA
Trp
>WENV170209963
CEPV01093969
182374
Gammaproteobacteria
CAT
Met
>WENV170210039
CEPV01103280
184446
Gammaproteobacteria
GAC
Val
>WENV170210160
CEPV01142230
189904
Gammaproteobacteria
CCA
Trp
>WENV170210291
CEPV01182083
141225
Gammaproteobacteria
GTA
Tyr
>WENV170210292
CEPV01182083
402011
Gammaproteobacteria
TCC
Gly
>WENV170210395
CEPV01200737
400372
Gammaproteobacteria
CCT
Arg
>WENV170210419
CEPV01202439
488965
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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