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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170340911
CETC01051441
184230
Gammaproteobacteria
TCT
Arg
>WENV170341077
CETC01067705
29419
Gammaproteobacteria
GGA
Ser
>WENV170340672
CETC01020411
183804
Gammaproteobacteria
CAT
Met
>WENV170340676
CETC01020782
183804
Gammaproteobacteria
CAT
Met
>WENV170341285
CETC01144624
284132
Gammaproteobacteria
TTT
Lys
>WENV170340720
CETC01024269
281275
Gammaproteobacteria
TGT
Thr
>WENV170340506
CETC01003270
184446
Gammaproteobacteria
GAC
Val
>WENV170341241
CETC01129262
178469
Gammaproteobacteria
CAT
Met
>WENV170340596
CETC01013294
178544
Gammaproteobacteria
CAT
Met
>WENV170341164
CETC01086107
399050
Gammaproteobacteria
CCT
Arg
>WENV170340697
CETC01021570
197233
Gammaproteobacteria
CAT
Met
>WENV170341031
CETC01063404
197233
Gammaproteobacteria
CAT
Met
>WENV170340487
CETC01001787
353123
Gammaproteobacteria
CCA
Trp
>WENV170340889
CETC01048375
444310
Gammaproteobacteria
TTG
Gln
>WENV170340840
CETC01039497
74240
Gammaproteobacteria
CAA
Leu
>WENV170340636
CETC01016897
329164
Gammaproteobacteria
TTT
Lys
>WENV170340597
CETC01013294
118219
Gammaproteobacteria
TAG
Leu
>WENV170341041
CETC01065368
178540
Gammaproteobacteria
TGG
Pro
>WENV170340477
CETC01001026
480516
Gammaproteobacteria
GCA
Cys
>WENV170340520
CETC01005125
480516
Gammaproteobacteria
GCA
Cys
>WENV170340910
CETC01051441
178473
Gammaproteobacteria
TGG
Pro
>WENV170340959
CETC01057002
56108
Gammaproteobacteria
TGA
Ser
>WENV170340698
CETC01021570
286623
Gammaproteobacteria
GTT
Asn
>WENV170340763
CETC01030007
286623
Gammaproteobacteria
GTT
Asn
>WENV170340485
CETC01001787
481325
Gammaproteobacteria
TCC
Gly
>WENV170340877
CETC01044832
176241
Gammaproteobacteria
CGG
Pro
>WENV170340600
CETC01013496
118413
Gammaproteobacteria
TAG
Leu
>WENV170340747
CETC01028173
181520
Gammaproteobacteria
ACG
Arg
>WENV170340930
CETC01053147
29724
Gammaproteobacteria
GCT
Ser
>WENV170340519
CETC01005125
306288
Gammaproteobacteria
GCC
Gly
>WENV170340893
CETC01048883
306288
Gammaproteobacteria
GCC
Gly
>WENV170341310
CETC01152386
176664
Gammaproteobacteria
CCT
Arg
>WENV170340946
CETC01054869
346373
Gammaproteobacteria
GAA
Phe
>WENV170340741
CETC01027147
239021
Gammaproteobacteria
TCT
Arg
>WENV170340590
CETC01012080
89769
Gammaproteobacteria
CAG
Leu
>WENV170340673
CETC01020712
89769
Gammaproteobacteria
CAG
Leu
>WENV170340674
CETC01020712
89769
Gammaproteobacteria
CAG
Leu
>WENV170341294
CETC01147848
176665
Gammaproteobacteria
CGG
Pro
>WENV170340967
CETC01058275
23169
Gammaproteobacteria
GGA
Ser
>WENV170340739
CETC01027058
281283
Gammaproteobacteria
GTG
His
>WENV170340533
CETC01006173
176478
Gammaproteobacteria
CAT
Met
>WENV170340621
CETC01015090
119044
Gammaproteobacteria
GTA
Tyr
>WENV170340529
CETC01006046
186591
Gammaproteobacteria
ACG
Arg
>WENV170340530
CETC01006046
186591
Gammaproteobacteria
ACG
Arg
>WENV170340531
CETC01006046
186591
Gammaproteobacteria
ACG
Arg
>WENV170340885
CETC01047455
20968
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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