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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170408142
CEUI01004936
186591
Gammaproteobacteria
ACG
Arg
>WENV170408639
CEUI01050009
180679
Gammaproteobacteria
CCA
Trp
>WENV170409000
CEUI01132767
180678
Gammaproteobacteria
CCG
Arg
>WENV170408298
CEUI01013683
399050
Gammaproteobacteria
CCT
Arg
>WENV170408796
CEUI01062233
176241
Gammaproteobacteria
CGG
Pro
>WENV170408603
CEUI01043663
481314
Gammaproteobacteria
GCA
Cys
>WENV170408953
CEUI01112900
284131
Gammaproteobacteria
GCC
Gly
>WENV170408682
CEUI01053037
29419
Gammaproteobacteria
GGA
Ser
>WENV170408788
CEUI01061365
117821
Gammaproteobacteria
GTA
Tyr
>WENV170408428
CEUI01026206
280882
Gammaproteobacteria
GTG
His
>WENV170408299
CEUI01013773
299227
Gammaproteobacteria
GTT
Asn
>WENV170408540
CEUI01035470
299227
Gammaproteobacteria
GTT
Asn
>WENV170408721
CEUI01055715
299227
Gammaproteobacteria
GTT
Asn
>WENV170408161
CEUI01005773
73063
Gammaproteobacteria
TAA
Leu
>WENV170408581
CEUI01040383
118413
Gammaproteobacteria
TAG
Leu
>WENV170408158
CEUI01005773
56108
Gammaproteobacteria
TGA
Ser
>WENV170408431
CEUI01026223
176244
Gammaproteobacteria
TGG
Pro
>WENV170408269
CEUI01011796
315775
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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