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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615103
OOEA01057202
166654
Gammaproteobacteria
GAC
Val
>WENV183615251
OOEA01143195
237766
Gammaproteobacteria
TAC
Val
>WENV183615162
OOEA01085484
243823
Gammaproteobacteria
GCC
Gly
>WENV183614886
OOEA01006525
145368
Gammaproteobacteria
CCT
Arg
>WENV183614974
OOEA01022681
58822
Gammaproteobacteria
CAA
Leu
>WENV183615253
OOEA01144966
147053
Gammaproteobacteria
GTT
Asn
>WENV183614869
OOEA01005097
235452
Gammaproteobacteria
GAA
Phe
>WENV183614781
OOEA01000693
240619
Gammaproteobacteria
TGT
Thr
>WENV183614932
OOEA01015050
338534
Gammaproteobacteria
TCC
Gly
>WENV183615140
OOEA01072312
16284
Gammaproteobacteria
TGA
Ser
>WENV183614872
OOEA01005478
45345
Gammaproteobacteria
GGA
Ser
>WENV183614931
OOEA01015050
95983
Gammaproteobacteria
>WENV183615163
OOEA01085484
59155
Gammaproteobacteria
TAA
Leu
>WENV183615250
OOEA01142487
97105
Gammaproteobacteria
GTA
Tyr
>WENV183614889
OOEA01006635
421020
Gammaproteobacteria
GCA
Cys
>WENV183615031
OOEA01033055
148442
Gammaproteobacteria
ACG
Arg
>WENV183614837
OOEA01002839
148452
Gammaproteobacteria
CCT
Arg
>WENV183614840
OOEA01003137
241136
Gammaproteobacteria
TTG
Gln
>WENV183614887
OOEA01006635
235886
Gammaproteobacteria
TTC
Glu
>WENV183615200
OOEA01106078
237712
Gammaproteobacteria
TGT
Thr
>WENV183615072
OOEA01048958
262546
Gammaproteobacteria
TGC
Ala
>WENV183614995
OOEA01026661
262546
Gammaproteobacteria
TGC
Ala
>WENV183614788
OOEA01000815
262546
Gammaproteobacteria
TGC
Ala
>WENV183615220
OOEA01114700
235884
Gammaproteobacteria
TAC
Val
>WENV183615203
OOEA01106678
237713
Gammaproteobacteria
TAC
Val
>WENV183615249
OOEA01142045
16460
Gammaproteobacteria
TGA
Ser
>WENV183614906
OOEA01008962
175964
Gammaproteobacteria
CAT
Met
>WENV183614975
OOEA01022885
150648
Gammaproteobacteria
TGG
Pro
>WENV183614767
OOEA01000295
59485
Gammaproteobacteria
CAG
Leu
>WENV183614784
OOEA01000693
239187
Gammaproteobacteria
GGT
Thr
>WENV183615201
OOEA01106078
237711
Gammaproteobacteria
GAA
Phe
>WENV183614834
OOEA01002789
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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