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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615548
OOEB01035793
8605
Gammaproteobacteria
>WENV183615739
OOEB01117427
190582
Gammaproteobacteria
CAT
Met
>WENV183615263
OOEB01000318
180052
Gammaproteobacteria
CCT
Arg
>WENV183615525
OOEB01032586
401684
Gammaproteobacteria
CCT
Arg
>WENV183615319
OOEB01003106
355124
Gammaproteobacteria
GAA
Phe
>WENV183615714
OOEB01104997
283224
Gammaproteobacteria
GAA
Phe
>WENV183615552
OOEB01036886
179136
Gammaproteobacteria
GAC
Val
>WENV183615343
OOEB01006075
176301
Gammaproteobacteria
GAT
Ile
>WENV183615517
OOEB01030603
296672
Gammaproteobacteria
GGT
Thr
>WENV183615815
OOEB01161301
118205
Gammaproteobacteria
GTA
Tyr
>WENV183615845
OOEB01181555
283226
Gammaproteobacteria
TAC
Val
>WENV183615567
OOEB01043289
481325
Gammaproteobacteria
TCC
Gly
>WENV183615295
OOEB01001442
176069
Gammaproteobacteria
TCT
Arg
>WENV183615547
OOEB01035793
20487
Gammaproteobacteria
TGA
Ser
>WENV183615344
OOEB01006075
297790
Gammaproteobacteria
TGC
Ala
>WENV183615715
OOEB01104997
283225
Gammaproteobacteria
TGT
Thr
>WENV183615731
OOEB01114618
282902
Gammaproteobacteria
TGT
Thr
>WENV183615563
OOEB01041597
281282
Gammaproteobacteria
TTC
Glu
>WENV183615855
OOEB01190472
329164
Gammaproteobacteria
TTT
Lys
>WENV183615448
OOEB01018802
351236
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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