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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617450
OOEG01000107
179136
Gammaproteobacteria
GAC
Val
>WENV183617459
OOEG01000288
229522
Gammaproteobacteria
ACG
Arg
>WENV183617460
OOEG01000288
229522
Gammaproteobacteria
ACG
Arg
>WENV183617462
OOEG01000491
451238
Gammaproteobacteria
GCC
Gly
>WENV183617469
OOEG01000560
190582
Gammaproteobacteria
CAT
Met
>WENV183617492
OOEG01001659
355552
Gammaproteobacteria
TTC
Glu
>WENV183617521
OOEG01004036
290045
Gammaproteobacteria
GGT
Thr
>WENV183617518
OOEG01004036
282902
Gammaproteobacteria
TGT
Thr
>WENV183617534
OOEG01005414
73863
Gammaproteobacteria
CAG
Leu
>WENV183617554
OOEG01008074
176069
Gammaproteobacteria
TCT
Arg
>WENV183617560
OOEG01008807
297790
Gammaproteobacteria
TGC
Ala
>WENV183617577
OOEG01010001
74416
Gammaproteobacteria
TAA
Leu
>WENV183617576
OOEG01010001
481678
Gammaproteobacteria
GCA
Cys
>WENV183617585
OOEG01011319
331330
Gammaproteobacteria
TAC
Val
>WENV183617606
OOEG01014628
346373
Gammaproteobacteria
GAA
Phe
>WENV183617644
OOEG01029096
281276
Gammaproteobacteria
GGT
Thr
>WENV183617643
OOEG01029096
399250
Gammaproteobacteria
TCC
Gly
>WENV183617657
OOEG01033070
292006
Gammaproteobacteria
TGC
Ala
>WENV183617693
OOEG01047715
176301
Gammaproteobacteria
GAT
Ile
>WENV183617704
OOEG01054202
481023
Gammaproteobacteria
GCA
Cys
>WENV183617705
OOEG01054202
73481
Gammaproteobacteria
TAA
Leu
>WENV183617724
OOEG01062660
281282
Gammaproteobacteria
TTC
Glu
>WENV183617774
OOEG01095681
242775
Gammaproteobacteria
TGG
Pro
>WENV183617809
OOEG01119194
20487
Gammaproteobacteria
TGA
Ser
>WENV183617835
OOEG01142483
329164
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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