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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619312
OOFQ01000890
181277
Gammaproteobacteria
ACG
Arg
>WENV183619609
OOFQ01023975
186591
Gammaproteobacteria
ACG
Arg
>WENV183619244
OOFQ01000140
181365
Gammaproteobacteria
CAT
Met
>WENV183619556
OOFQ01016915
177028
Gammaproteobacteria
CAT
Met
>WENV183619358
OOFQ01002052
280812
Gammaproteobacteria
GAA
Phe
>WENV183619492
OOFQ01010039
283521
Gammaproteobacteria
GAA
Phe
>WENV183619218
OOFQ01000003
176301
Gammaproteobacteria
GAT
Ile
>WENV183619267
OOFQ01000395
176301
Gammaproteobacteria
GAT
Ile
>WENV183619748
OOFQ01043272
176301
Gammaproteobacteria
GAT
Ile
>WENV183619489
OOFQ01009890
480629
Gammaproteobacteria
GCA
Cys
>WENV183619488
OOFQ01009890
311084
Gammaproteobacteria
GCC
Gly
>WENV183619233
OOFQ01000091
176796
Gammaproteobacteria
GGG
Pro
>WENV183619296
OOFQ01000707
291402
Gammaproteobacteria
GTG
His
>WENV183619613
OOFQ01024107
281791
Gammaproteobacteria
GTG
His
>WENV183619352
OOFQ01001897
481325
Gammaproteobacteria
TCC
Gly
>WENV183619338
OOFQ01001547
297858
Gammaproteobacteria
TGC
Ala
>WENV183619294
OOFQ01000707
201377
Gammaproteobacteria
TGG
Pro
>WENV183619334
OOFQ01001469
201377
Gammaproteobacteria
TGG
Pro
>WENV183619667
OOFQ01029469
201377
Gammaproteobacteria
TGG
Pro
>WENV183619737
OOFQ01040964
201377
Gammaproteobacteria
TGG
Pro
>WENV183619350
OOFQ01001897
282902
Gammaproteobacteria
TGT
Thr
>WENV183619570
OOFQ01018059
282902
Gammaproteobacteria
TGT
Thr
>WENV183619840
OOFQ01060455
282902
Gammaproteobacteria
TGT
Thr
>WENV183619433
OOFQ01005866
283486
Gammaproteobacteria
TGT
Thr
>WENV183619684
OOFQ01031741
286980
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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