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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619960
OOFR01000967
363863
Gammaproteobacteria
CCA
Trp
>WENV183620017
OOFR01002288
282902
Gammaproteobacteria
TGT
Thr
>WENV183620086
OOFR01004714
191061
Gammaproteobacteria
ACG
Arg
>WENV183620089
OOFR01004874
176796
Gammaproteobacteria
GGG
Pro
>WENV183620188
OOFR01012639
480629
Gammaproteobacteria
GCA
Cys
>WENV183620190
OOFR01013161
282550
Gammaproteobacteria
TAC
Val
>WENV183620191
OOFR01013161
178538
Gammaproteobacteria
GTC
Asp
>WENV183620231
OOFR01016778
281791
Gammaproteobacteria
GTG
His
>WENV183620337
OOFR01034949
296670
Gammaproteobacteria
TGT
Thr
>WENV183620384
OOFR01046305
181277
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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