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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183621146
OOFT01010628
147048
Gammaproteobacteria
CCA
Trp
>WENV183621209
OOFT01017421
149036
Gammaproteobacteria
CCA
Trp
>WENV183621186
OOFT01015020
412799
Gammaproteobacteria
GCA
Cys
>WENV183621322
OOFT01047679
6972
Gammaproteobacteria
>WENV183621255
OOFT01031841
277901
Gammaproteobacteria
TGT
Thr
>WENV183620999
OOFT01002135
8480
Gammaproteobacteria
GCT
Ser
>WENV183621001
OOFT01002135
148442
Gammaproteobacteria
ACG
Arg
>WENV183621000
OOFT01002135
148442
Gammaproteobacteria
ACG
Arg
>WENV183621262
OOFT01032923
173040
Gammaproteobacteria
GAC
Val
>WENV183621321
OOFT01047679
18218
Gammaproteobacteria
TGA
Ser
>WENV183620994
OOFT01001883
262546
Gammaproteobacteria
TGC
Ala
>WENV183620952
OOFT01000487
262546
Gammaproteobacteria
TGC
Ala
>WENV183620934
OOFT01000118
262546
Gammaproteobacteria
TGC
Ala
>WENV183620951
OOFT01000487
147050
Gammaproteobacteria
GAT
Ile
>WENV183621201
OOFT01016474
288001
Gammaproteobacteria
TTG
Gln
>WENV183621105
OOFT01007015
237711
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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