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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183621471
OOFU01002078
331330
Gammaproteobacteria
TAC
Val
>WENV183621420
OOFU01000622
183784
Gammaproteobacteria
ACG
Arg
>WENV183621421
OOFU01000622
183784
Gammaproteobacteria
ACG
Arg
>WENV183621426
OOFU01000663
74416
Gammaproteobacteria
TAA
Leu
>WENV183621393
OOFU01000131
176069
Gammaproteobacteria
TCT
Arg
>WENV183621505
OOFU01003886
178471
Gammaproteobacteria
GTT
Asn
>WENV183621506
OOFU01003886
178471
Gammaproteobacteria
GTT
Asn
>WENV183621383
OOFU01000046
297790
Gammaproteobacteria
TGC
Ala
>WENV183621501
OOFU01003432
292006
Gammaproteobacteria
TGC
Ala
>WENV183621793
OOFU01061208
480516
Gammaproteobacteria
GCA
Cys
>WENV183621815
OOFU01070275
117798
Gammaproteobacteria
CAA
Leu
>WENV183621464
OOFU01001799
490292
Gammaproteobacteria
TCC
Gly
>WENV183621465
OOFU01001799
290045
Gammaproteobacteria
GGT
Thr
>WENV183621387
OOFU01000096
179136
Gammaproteobacteria
GAC
Val
>WENV183621425
OOFU01000663
481678
Gammaproteobacteria
GCA
Cys
>WENV183621792
OOFU01061208
306288
Gammaproteobacteria
GCC
Gly
>WENV183621382
OOFU01000046
176301
Gammaproteobacteria
GAT
Ile
>WENV183621422
OOFU01000642
317792
Gammaproteobacteria
TGC
Ala
>WENV183621638
OOFU01020771
181277
Gammaproteobacteria
ACG
Arg
>WENV183621389
OOFU01000103
118640
Gammaproteobacteria
TAG
Leu
>WENV183621462
OOFU01001799
282902
Gammaproteobacteria
TGT
Thr
>WENV183621691
OOFU01031475
282902
Gammaproteobacteria
TGT
Thr
>WENV183621388
OOFU01000103
190582
Gammaproteobacteria
CAT
Met
>WENV183621402
OOFU01000244
180679
Gammaproteobacteria
CCA
Trp
>WENV183621802
OOFU01065372
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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