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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183624285
OOGD01000193
331330
Gammaproteobacteria
TAC
Val
>WENV183624299
OOGD01000431
297858
Gammaproteobacteria
TGC
Ala
>WENV183624256
OOGD01000024
183784
Gammaproteobacteria
ACG
Arg
>WENV183624257
OOGD01000024
183784
Gammaproteobacteria
ACG
Arg
>WENV183624338
OOGD01001451
283221
Gammaproteobacteria
GCC
Gly
>WENV183624340
OOGD01001451
74416
Gammaproteobacteria
TAA
Leu
>WENV183624302
OOGD01000479
176069
Gammaproteobacteria
TCT
Arg
>WENV183624619
OOGD01067196
176069
Gammaproteobacteria
TCT
Arg
>WENV183624291
OOGD01000334
297790
Gammaproteobacteria
TGC
Ala
>WENV183624404
OOGD01006407
490292
Gammaproteobacteria
TCC
Gly
>WENV183624593
OOGD01056548
490292
Gammaproteobacteria
TCC
Gly
>WENV183624283
OOGD01000191
481678
Gammaproteobacteria
GCA
Cys
>WENV183624339
OOGD01001451
491391
Gammaproteobacteria
GCA
Cys
>WENV183624608
OOGD01062311
176664
Gammaproteobacteria
CCT
Arg
>WENV183624290
OOGD01000334
176301
Gammaproteobacteria
GAT
Ile
>WENV183624296
OOGD01000397
317792
Gammaproteobacteria
TGC
Ala
>WENV183624278
OOGD01000133
118640
Gammaproteobacteria
TAG
Leu
>WENV183624420
OOGD01008423
118640
Gammaproteobacteria
TAG
Leu
>WENV183624277
OOGD01000133
190582
Gammaproteobacteria
CAT
Met
>WENV183624263
OOGD01000051
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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