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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183626128
OOGH01017485
176796
Gammaproteobacteria
GGG
Pro
>WENV183625907
OOGH01000076
311084
Gammaproteobacteria
GCC
Gly
>WENV183626255
OOGH01047775
30550
Gammaproteobacteria
GGA
Ser
>WENV183625908
OOGH01000076
480629
Gammaproteobacteria
GCA
Cys
>WENV183626114
OOGH01014997
243308
Gammaproteobacteria
TGG
Pro
>WENV183626219
OOGH01037424
178467
Gammaproteobacteria
GGG
Pro
>WENV183626084
OOGH01010987
335783
Gammaproteobacteria
GTT
Asn
>WENV183625889
OOGH01000030
176301
Gammaproteobacteria
GAT
Ile
>WENV183625951
OOGH01000521
176301
Gammaproteobacteria
GAT
Ile
>WENV183625881
OOGH01000001
340790
Gammaproteobacteria
TGT
Thr
>WENV183625918
OOGH01000153
281791
Gammaproteobacteria
GTG
His
>WENV183625891
OOGH01000036
286980
Gammaproteobacteria
TTT
Lys
>WENV183626055
OOGH01006993
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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