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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183627030
OOGK01025335
331330
Gammaproteobacteria
TAC
Val
>WENV183627164
OOGK01051073
20552
Gammaproteobacteria
GCT
Ser
>WENV183626844
OOGK01003956
185999
Gammaproteobacteria
CCG
Arg
>WENV183626770
OOGK01000055
311084
Gammaproteobacteria
GCC
Gly
>WENV183626771
OOGK01000055
480629
Gammaproteobacteria
GCA
Cys
>WENV183626935
OOGK01012667
243308
Gammaproteobacteria
TGG
Pro
>WENV183626748
OOGK01000001
176301
Gammaproteobacteria
GAT
Ile
>WENV183626804
OOGK01001097
176301
Gammaproteobacteria
GAT
Ile
>WENV183626761
OOGK01000019
340790
Gammaproteobacteria
TGT
Thr
>WENV183626820
OOGK01001977
340790
Gammaproteobacteria
TGT
Thr
>WENV183626779
OOGK01000102
281791
Gammaproteobacteria
GTG
His
>WENV183626841
OOGK01003863
181277
Gammaproteobacteria
ACG
Arg
>WENV183626790
OOGK01000304
286980
Gammaproteobacteria
TTT
Lys
>WENV183627120
OOGK01042717
282902
Gammaproteobacteria
TGT
Thr
>WENV183627266
OOGK01080258
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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