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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183627863
OOGL01064645
180053
Gammaproteobacteria
CAT
Met
>WENV183627945
OOGL01087755
346373
Gammaproteobacteria
GAA
Phe
>WENV183627940
OOGL01087178
480516
Gammaproteobacteria
GCA
Cys
>WENV183627939
OOGL01087178
306288
Gammaproteobacteria
GCC
Gly
>WENV183627370
OOGL01001413
349758
Gammaproteobacteria
GGC
Ala
>WENV183627815
OOGL01052215
281276
Gammaproteobacteria
GGT
Thr
>WENV183627736
OOGL01035984
282899
Gammaproteobacteria
GTT
Asn
>WENV183627621
OOGL01019397
282550
Gammaproteobacteria
TAC
Val
>WENV183627415
OOGL01003291
292006
Gammaproteobacteria
TGC
Ala
>WENV183627741
OOGL01036418
281282
Gammaproteobacteria
TTC
Glu
>WENV183627697
OOGL01029478
351236
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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