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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183628496
OOGO01000108
73123
Gammaproteobacteria
CAA
Leu
>WENV183628517
OOGO01000311
20273
Gammaproteobacteria
TGA
Ser
>WENV183628698
OOGO01008314
314350
Gammaproteobacteria
CCA
Trp
>WENV183628499
OOGO01000141
176662
Gammaproteobacteria
ACG
Arg
>WENV183628500
OOGO01000141
176662
Gammaproteobacteria
ACG
Arg
>WENV183628487
OOGO01000058
229289
Gammaproteobacteria
TGG
Pro
>WENV183628572
OOGO01002054
281282
Gammaproteobacteria
TTC
Glu
>WENV183628545
OOGO01000765
74416
Gammaproteobacteria
TAA
Leu
>WENV183628594
OOGO01002677
329164
Gammaproteobacteria
TTT
Lys
>WENV183628595
OOGO01002677
329164
Gammaproteobacteria
TTT
Lys
>WENV183628642
OOGO01004407
176069
Gammaproteobacteria
TCT
Arg
>WENV183628493
OOGO01000071
176663
Gammaproteobacteria
GGG
Pro
>WENV183628604
OOGO01003029
229522
Gammaproteobacteria
ACG
Arg
>WENV183628605
OOGO01003029
229522
Gammaproteobacteria
ACG
Arg
>WENV183628606
OOGO01003029
229522
Gammaproteobacteria
ACG
Arg
>WENV183628503
OOGO01000196
297790
Gammaproteobacteria
TGC
Ala
>WENV183628774
OOGO01022427
292006
Gammaproteobacteria
TGC
Ala
>WENV183628484
OOGO01000043
480516
Gammaproteobacteria
GCA
Cys
>WENV183628512
OOGO01000232
338424
Gammaproteobacteria
TAC
Val
>WENV183628486
OOGO01000053
176661
Gammaproteobacteria
GAC
Val
>WENV183628510
OOGO01000232
281279
Gammaproteobacteria
TAC
Val
>WENV183628522
OOGO01000547
179136
Gammaproteobacteria
GAC
Val
>WENV183628544
OOGO01000765
481678
Gammaproteobacteria
GCA
Cys
>WENV183628481
OOGO01000033
306288
Gammaproteobacteria
GCC
Gly
>WENV183628483
OOGO01000043
306288
Gammaproteobacteria
GCC
Gly
>WENV183628655
OOGO01005151
287558
Gammaproteobacteria
TTC
Glu
>WENV183628480
OOGO01000013
176664
Gammaproteobacteria
CCT
Arg
>WENV183628502
OOGO01000196
176301
Gammaproteobacteria
GAT
Ile
>WENV183628548
OOGO01000965
317792
Gammaproteobacteria
TGC
Ala
>WENV183628764
OOGO01020127
56623
Gammaproteobacteria
GGA
Ser
>WENV183628485
OOGO01000047
176665
Gammaproteobacteria
CGG
Pro
>WENV183628801
OOGO01028338
285547
Gammaproteobacteria
TTG
Gln
>WENV183628930
OOGO01066943
180681
Gammaproteobacteria
TGG
Pro
>WENV183628489
OOGO01000058
281283
Gammaproteobacteria
GTG
His
>WENV183628531
OOGO01000684
118640
Gammaproteobacteria
TAG
Leu
>WENV183628929
OOGO01066943
118640
Gammaproteobacteria
TAG
Leu
>WENV183628714
OOGO01010092
180679
Gammaproteobacteria
CCA
Trp
>WENV183628871
OOGO01047306
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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