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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183629033
OOGP01001601
282018
Gammaproteobacteria
TGT
Thr
>WENV183629044
OOGP01001793
181277
Gammaproteobacteria
ACG
Arg
>WENV183629046
OOGP01001833
176301
Gammaproteobacteria
GAT
Ile
>WENV183629059
OOGP01002375
340790
Gammaproteobacteria
TGT
Thr
>WENV183629136
OOGP01005264
311084
Gammaproteobacteria
GCC
Gly
>WENV183629137
OOGP01005264
480629
Gammaproteobacteria
GCA
Cys
>WENV183629141
OOGP01005392
281791
Gammaproteobacteria
GTG
His
>WENV183629184
OOGP01007694
176301
Gammaproteobacteria
GAT
Ile
>WENV183629190
OOGP01008010
282902
Gammaproteobacteria
TGT
Thr
>WENV183629225
OOGP01010717
243308
Gammaproteobacteria
TGG
Pro
>WENV183629251
OOGP01014026
176796
Gammaproteobacteria
GGG
Pro
>WENV183629262
OOGP01015400
201377
Gammaproteobacteria
TGG
Pro
>WENV183629266
OOGP01015442
181365
Gammaproteobacteria
CAT
Met
>WENV183629283
OOGP01016504
243308
Gammaproteobacteria
TGG
Pro
>WENV183629307
OOGP01020509
176796
Gammaproteobacteria
GGG
Pro
>WENV183629455
OOGP01044764
481325
Gammaproteobacteria
TCC
Gly
>WENV183629506
OOGP01056171
185999
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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