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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183631512
OOGU01141939
73123
Gammaproteobacteria
CAA
Leu
>WENV183630709
OOGU01000729
183784
Gammaproteobacteria
ACG
Arg
>WENV183631385
OOGU01096087
281276
Gammaproteobacteria
GGT
Thr
>WENV183630682
OOGU01000331
311084
Gammaproteobacteria
GCC
Gly
>WENV183630700
OOGU01000637
74416
Gammaproteobacteria
TAA
Leu
>WENV183631214
OOGU01051766
176069
Gammaproteobacteria
TCT
Arg
>WENV183631035
OOGU01020156
176663
Gammaproteobacteria
GGG
Pro
>WENV183631306
OOGU01075420
317782
Gammaproteobacteria
TAC
Val
>WENV183630749
OOGU01001495
297790
Gammaproteobacteria
TGC
Ala
>WENV183631503
OOGU01138150
292006
Gammaproteobacteria
TGC
Ala
>WENV183630683
OOGU01000331
480629
Gammaproteobacteria
GCA
Cys
>WENV183631495
OOGU01134552
182472
Gammaproteobacteria
GTC
Asp
>WENV183631468
OOGU01125317
481325
Gammaproteobacteria
TCC
Gly
>WENV183630794
OOGU01002553
490292
Gammaproteobacteria
TCC
Gly
>WENV183630654
OOGU01000113
207735
Gammaproteobacteria
GAC
Val
>WENV183630795
OOGU01002553
290045
Gammaproteobacteria
GGT
Thr
>WENV183630699
OOGU01000637
481678
Gammaproteobacteria
GCA
Cys
>WENV183631416
OOGU01107261
306288
Gammaproteobacteria
GCC
Gly
>WENV183630748
OOGU01001495
176301
Gammaproteobacteria
GAT
Ile
>WENV183630759
OOGU01001660
317792
Gammaproteobacteria
TGC
Ala
>WENV183630789
OOGU01002449
281791
Gammaproteobacteria
GTG
His
>WENV183630761
OOGU01001682
286980
Gammaproteobacteria
TTT
Lys
>WENV183630757
OOGU01001606
118640
Gammaproteobacteria
TAG
Leu
>WENV183630792
OOGU01002553
282902
Gammaproteobacteria
TGT
Thr
>WENV183631393
OOGU01098720
282902
Gammaproteobacteria
TGT
Thr
>WENV183630770
OOGU01001863
180679
Gammaproteobacteria
CCA
Trp
>WENV183631043
OOGU01021530
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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