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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183635330
OOIU01000040
117757
Gammaproteobacteria
>WENV183635380
OOIU01002770
117930
Gammaproteobacteria
CAA
Leu
>WENV183635374
OOIU01001934
73161
Gammaproteobacteria
CAG
Leu
>WENV183635357
OOIU01000253
176868
Gammaproteobacteria
CAT
Met
>WENV183635287
OOIU01000016
29387
Gammaproteobacteria
GGA
Ser
>WENV183635385
OOIU01005636
176628
Gammaproteobacteria
GGG
Pro
>WENV183635337
OOIU01000054
175989
Gammaproteobacteria
GGG
Pro
>WENV183635376
OOIU01001979
341033
Gammaproteobacteria
GTT
Asn
>WENV183635362
OOIU01000438
281229
Gammaproteobacteria
GTT
Asn
>WENV183635370
OOIU01000912
117929
Gammaproteobacteria
TAG
Leu
>WENV183635280
OOIU01000010
175982
Gammaproteobacteria
TCT
Arg
>WENV183635373
OOIU01001473
319467
Gammaproteobacteria
TGT
Thr
>WENV183635336
OOIU01000054
281352
Gammaproteobacteria
TGT
Thr
>WENV183635353
OOIU01000175
281352
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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