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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183635431
OOIV01000012
237462
Gammaproteobacteria
GTG
His
>WENV183635438
OOIV01000020
44864
Gammaproteobacteria
TGA
Ser
>WENV183635452
OOIV01000029
95576
Gammaproteobacteria
TAG
Leu
>WENV183635455
OOIV01000029
147054
Gammaproteobacteria
CAT
Met
>WENV183635451
OOIV01000029
147054
Gammaproteobacteria
CAT
Met
>WENV183635476
OOIV01000058
24181
Gammaproteobacteria
CGA
Ser
>WENV183635479
OOIV01000061
23364
Gammaproteobacteria
>WENV183635480
OOIV01000061
23364
Gammaproteobacteria
>WENV183635484
OOIV01000070
147159
Gammaproteobacteria
>WENV183635483
OOIV01000070
147159
Gammaproteobacteria
>WENV183635482
OOIV01000070
147159
Gammaproteobacteria
>WENV183635489
OOIV01000101
95575
Gammaproteobacteria
>WENV183635502
OOIV01000149
80618
Gammaproteobacteria
TAA
Leu
>WENV183635503
OOIV01000150
144739
Gammaproteobacteria
GGG
Pro
>WENV183635504
OOIV01000168
144732
Gammaproteobacteria
TCT
Arg
>WENV183635511
OOIV01000233
249887
Gammaproteobacteria
GGT
Thr
>WENV183635515
OOIV01000559
58859
Gammaproteobacteria
CAG
Leu
>WENV183635521
OOIV01000789
411785
Gammaproteobacteria
CCC
Gly
>WENV183635530
OOIV01001959
239650
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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