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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183635566
OOIW01000003
307413
Gammaproteobacteria
TTT
Lys
>WENV183635567
OOIW01000003
307413
Gammaproteobacteria
TTT
Lys
>WENV183635568
OOIW01000003
307413
Gammaproteobacteria
TTT
Lys
>WENV183635556
OOIW01000003
95576
Gammaproteobacteria
TAG
Leu
>WENV183635563
OOIW01000003
144732
Gammaproteobacteria
TCT
Arg
>WENV183635565
OOIW01000003
315638
Gammaproteobacteria
TAC
Val
>WENV183635593
OOIW01000010
31879
Gammaproteobacteria
GGA
Ser
>WENV183635592
OOIW01000010
31879
Gammaproteobacteria
GGA
Ser
>WENV183635588
OOIW01000010
52367
Gammaproteobacteria
TGA
Ser
>WENV183635607
OOIW01000015
144739
Gammaproteobacteria
GGG
Pro
>WENV183635622
OOIW01000019
95575
Gammaproteobacteria
>WENV183635629
OOIW01000023
73589
Gammaproteobacteria
CAG
Leu
>WENV183635634
OOIW01000027
315638
Gammaproteobacteria
TAC
Val
>WENV183635633
OOIW01000027
315638
Gammaproteobacteria
TAC
Val
>WENV183635653
OOIW01000040
75381
Gammaproteobacteria
CAG
Leu
>WENV183635655
OOIW01000040
73589
Gammaproteobacteria
CAG
Leu
>WENV183635654
OOIW01000040
73589
Gammaproteobacteria
CAG
Leu
>WENV183635660
OOIW01000090
235837
Gammaproteobacteria
GTT
Asn
>WENV183635670
OOIW01000223
190805
Gammaproteobacteria
CCG
Arg
>WENV183635673
OOIW01000328
58859
Gammaproteobacteria
CAG
Leu
>WENV183635685
OOIW01000623
145562
Gammaproteobacteria
CAT
Met
>WENV183635689
OOIW01001025
319098
Gammaproteobacteria
TAC
Val
>WENV183635699
OOIW01001654
16301
Gammaproteobacteria
TGA
Ser
>WENV183635700
OOIW01002155
67362
Gammaproteobacteria
TAA
Leu
>WENV183635707
OOIW01004020
145335
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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