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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636204
OOJR01026833
422716
Gammaproteobacteria
TTG
Gln
>WENV183636192
OOJR01001198
34264
Gammaproteobacteria
GGA
Ser
>WENV183636209
OOJR01046601
317782
Gammaproteobacteria
TAC
Val
>WENV183636187
OOJR01000604
117757
Gammaproteobacteria
>WENV183636205
OOJR01035809
20296
Gammaproteobacteria
TGA
Ser
>WENV183636148
OOJR01000073
175982
Gammaproteobacteria
TCT
Arg
>WENV183636139
OOJR01000019
281352
Gammaproteobacteria
TGT
Thr
>WENV183636198
OOJR01001943
281352
Gammaproteobacteria
TGT
Thr
>WENV183636201
OOJR01002914
117930
Gammaproteobacteria
CAA
Leu
>WENV183636191
OOJR01001176
175989
Gammaproteobacteria
GGG
Pro
>WENV183636142
OOJR01000019
336795
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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