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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636231
OOKD01000005
144739
Gammaproteobacteria
GGG
Pro
>WENV183636234
OOKD01000006
95576
Gammaproteobacteria
TAG
Leu
>WENV183636239
OOKD01000006
144732
Gammaproteobacteria
TCT
Arg
>WENV183636242
OOKD01000006
307413
Gammaproteobacteria
TTT
Lys
>WENV183636243
OOKD01000006
307413
Gammaproteobacteria
TTT
Lys
>WENV183636244
OOKD01000006
307413
Gammaproteobacteria
TTT
Lys
>WENV183636287
OOKD01000018
95575
Gammaproteobacteria
>WENV183636323
OOKD01000048
31879
Gammaproteobacteria
GGA
Ser
>WENV183636324
OOKD01000048
31879
Gammaproteobacteria
GGA
Ser
>WENV183636335
OOKD01000052
52367
Gammaproteobacteria
TGA
Ser
>WENV183636341
OOKD01000053
310681
Gammaproteobacteria
GTG
His
>WENV183636342
OOKD01000053
73589
Gammaproteobacteria
CAG
Leu
>WENV183636357
OOKD01000080
74241
Gammaproteobacteria
CAG
Leu
>WENV183636358
OOKD01000080
73589
Gammaproteobacteria
CAG
Leu
>WENV183636359
OOKD01000080
73589
Gammaproteobacteria
CAG
Leu
>WENV183636386
OOKD01000283
145335
Gammaproteobacteria
GGG
Pro
>WENV183636390
OOKD01000367
16301
Gammaproteobacteria
TGA
Ser
>WENV183636394
OOKD01000430
58859
Gammaproteobacteria
CAG
Leu
>WENV183636395
OOKD01000430
58859
Gammaproteobacteria
CAG
Leu
>WENV183636396
OOKD01000442
145562
Gammaproteobacteria
CAT
Met
>WENV183636397
OOKD01000462
108506
Gammaproteobacteria
GTA
Tyr
>WENV183636429
OOKD01000959
235837
Gammaproteobacteria
GTT
Asn
>WENV183636439
OOKD01001238
190805
Gammaproteobacteria
CCG
Arg
>WENV183636488
OOKD01011364
144732
Gammaproteobacteria
TCT
Arg
>WENV183636492
OOKD01012071
58812
Gammaproteobacteria
TAA
Leu
>WENV183636495
OOKD01012899
144732
Gammaproteobacteria
TCT
Arg
>WENV183636499
OOKD01017498
190805
Gammaproteobacteria
CCG
Arg
>WENV183636544
OOKD01105955
411785
Gammaproteobacteria
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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