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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636618
OOKJ01000080
96458
Gammaproteobacteria
CAG
Leu
>WENV183636675
OOKJ01007095
96458
Gammaproteobacteria
CAG
Leu
>WENV183636676
OOKJ01007095
96458
Gammaproteobacteria
CAG
Leu
>WENV183636677
OOKJ01007095
96458
Gammaproteobacteria
CAG
Leu
>WENV183636663
OOKJ01001430
29387
Gammaproteobacteria
GGA
Ser
>WENV183636658
OOKJ01000865
400277
Gammaproteobacteria
TTG
Gln
>WENV183636702
OOKJ01160840
341033
Gammaproteobacteria
GTT
Asn
>WENV183636692
OOKJ01107032
480569
Gammaproteobacteria
CCC
Gly
>WENV183636617
OOKJ01000080
366546
Gammaproteobacteria
GTG
His
>WENV183636682
OOKJ01029502
283441
Gammaproteobacteria
>WENV183636611
OOKJ01000063
117757
Gammaproteobacteria
>WENV183636613
OOKJ01000068
175982
Gammaproteobacteria
TCT
Arg
>WENV183636635
OOKJ01000289
281352
Gammaproteobacteria
TGT
Thr
>WENV183636672
OOKJ01002625
281352
Gammaproteobacteria
TGT
Thr
>WENV183636657
OOKJ01000865
117758
Gammaproteobacteria
TAG
Leu
>WENV183636654
OOKJ01000825
113312
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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