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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636907
OOQC01000115
75381
Gammaproteobacteria
CAG
Leu
>WENV183636909
OOQC01000115
73589
Gammaproteobacteria
CAG
Leu
>WENV183636908
OOQC01000115
73589
Gammaproteobacteria
CAG
Leu
>WENV183636926
OOQC01000483
144739
Gammaproteobacteria
GGG
Pro
>WENV183636927
OOQC01000486
95575
Gammaproteobacteria
>WENV183636934
OOQC01000713
31879
Gammaproteobacteria
GGA
Ser
>WENV183636935
OOQC01000713
31879
Gammaproteobacteria
GGA
Ser
>WENV183636938
OOQC01000768
307413
Gammaproteobacteria
TTT
Lys
>WENV183636939
OOQC01000768
307413
Gammaproteobacteria
TTT
Lys
>WENV183636937
OOQC01000768
315638
Gammaproteobacteria
TAC
Val
>WENV183636948
OOQC01003496
307413
Gammaproteobacteria
TTT
Lys
>WENV183636953
OOQC01006194
52367
Gammaproteobacteria
TGA
Ser
>WENV183636960
OOQC01012076
310681
Gammaproteobacteria
GTG
His
>WENV183636961
OOQC01012076
73589
Gammaproteobacteria
CAG
Leu
>WENV183636980
OOQC01034585
235837
Gammaproteobacteria
GTT
Asn
>WENV183637049
OOQC01427521
315638
Gammaproteobacteria
TAC
Val
>WENV183637048
OOQC01427521
315638
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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