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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183637125
OPGP01000020
400277
Gammaproteobacteria
TTG
Gln
>WENV183637126
OPGP01000020
400277
Gammaproteobacteria
TTG
Gln
>WENV183637129
OPGP01000020
175982
Gammaproteobacteria
TCT
Arg
>WENV183637124
OPGP01000020
117758
Gammaproteobacteria
TAG
Leu
>WENV183637146
OPGP01000029
29387
Gammaproteobacteria
GGA
Ser
>WENV183637145
OPGP01000029
113312
Gammaproteobacteria
TAA
Leu
>WENV183637151
OPGP01000033
113312
Gammaproteobacteria
TAA
Leu
>WENV183637154
OPGP01000034
366546
Gammaproteobacteria
GTG
His
>WENV183637159
OPGP01000038
117757
Gammaproteobacteria
>WENV183637162
OPGP01000046
175989
Gammaproteobacteria
GGG
Pro
>WENV183637173
OPGP01000067
281352
Gammaproteobacteria
TGT
Thr
>WENV183637192
OPGP01000128
281229
Gammaproteobacteria
GTT
Asn
>WENV183637201
OPGP01000220
117930
Gammaproteobacteria
CAA
Leu
>WENV183637202
OPGP01000226
113312
Gammaproteobacteria
TAA
Leu
>WENV183637204
OPGP01000322
228290
Gammaproteobacteria
CCG
Arg
>WENV183637226
OPGP01000438
73161
Gammaproteobacteria
CAG
Leu
>WENV183637227
OPGP01000460
281352
Gammaproteobacteria
TGT
Thr
>WENV183637233
OPGP01000544
176868
Gammaproteobacteria
CAT
Met
>WENV183637239
OPGP01000864
20296
Gammaproteobacteria
TGA
Ser
>WENV183637246
OPGP01001335
176628
Gammaproteobacteria
GGG
Pro
>WENV183637256
OPGP01002836
341033
Gammaproteobacteria
GTT
Asn
>WENV183637259
OPGP01002864
117929
Gammaproteobacteria
TAG
Leu
>WENV183637261
OPGP01003242
283441
Gammaproteobacteria
>WENV183637263
OPGP01003242
283441
Gammaproteobacteria
>WENV183637270
OPGP01005001
80948
Gammaproteobacteria
TAA
Leu
>WENV183637284
OPGP01009777
480569
Gammaproteobacteria
CCC
Gly
>WENV183637287
OPGP01010840
184784
Gammaproteobacteria
TGG
Pro
>WENV183637289
OPGP01010840
350703
Gammaproteobacteria
TTT
Lys
>WENV183637286
OPGP01010840
371341
Gammaproteobacteria
GTT
Asn
>WENV183637290
OPGP01010840
371341
Gammaproteobacteria
GTT
Asn
>WENV183637294
OPGP01012388
175982
Gammaproteobacteria
TCT
Arg
>WENV183637299
OPGP01016948
179613
Gammaproteobacteria
CAT
Met
>WENV183637303
OPGP01028673
80948
Gammaproteobacteria
TAA
Leu
>WENV183637305
OPGP01035749
228290
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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