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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183661533
ORJL010116373
282899
Gammaproteobacteria
GTT
Asn
>WENV183665087
ORJL010438955
178164
Gammaproteobacteria
GAT
Ile
>WENV183673541
ORJL011289271
292194
Gammaproteobacteria
GGT
Thr
>WENV183673330
ORJL011265548
56093
Gammaproteobacteria
GGA
Ser
>WENV183669602
ORJL010859038
357066
Gammaproteobacteria
TGC
Ala
>WENV183671882
ORJL011112017
357066
Gammaproteobacteria
TGC
Ala
>WENV183676032
ORJL011579847
2522
Gammaproteobacteria
>WENV183672885
ORJL011220218
451238
Gammaproteobacteria
GCC
Gly
>WENV183661532
ORJL010116373
178168
Gammaproteobacteria
ACG
Arg
>WENV183674429
ORJL011388446
182472
Gammaproteobacteria
GTC
Asp
>WENV183674583
ORJL011406306
289050
Gammaproteobacteria
CCA
Trp
>WENV183668198
ORJL010720000
287558
Gammaproteobacteria
TTC
Glu
>WENV183668199
ORJL010720000
287558
Gammaproteobacteria
TTC
Glu
>WENV183670779
ORJL010984244
287558
Gammaproteobacteria
TTC
Glu
>WENV183665088
ORJL010438955
281418
Gammaproteobacteria
TGC
Ala
>WENV183670761
ORJL010981890
201377
Gammaproteobacteria
TGG
Pro
>WENV183661687
ORJL010127519
284316
Gammaproteobacteria
TGT
Thr
>WENV183671774
ORJL011099767
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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