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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183681864
ORMF010366837
282899
Gammaproteobacteria
GTT
Asn
>WENV183683503
ORMF010583420
282899
Gammaproteobacteria
GTT
Asn
>WENV183692417
ORMF011913433
282899
Gammaproteobacteria
GTT
Asn
>WENV183694048
ORMF012177799
292194
Gammaproteobacteria
GGT
Thr
>WENV183693598
ORMF012107142
56093
Gammaproteobacteria
GGA
Ser
>WENV183681863
ORMF010366837
178168
Gammaproteobacteria
ACG
Arg
>WENV183695239
ORMF012356958
480368
Gammaproteobacteria
CCC
Gly
>WENV183684155
ORMF010669317
281418
Gammaproteobacteria
TGC
Ala
>WENV183680522
ORMF010193088
176301
Gammaproteobacteria
GAT
Ile
>WENV183694609
ORMF012259050
201377
Gammaproteobacteria
TGG
Pro
>WENV183681030
ORMF010254298
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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