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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183725880
PJQF01030172
20224
Gammaproteobacteria
CGA
Ser
>WENV183725418
PJQF01000001
481365
Gammaproteobacteria
GCA
Cys
>WENV183725417
PJQF01000001
73113
Gammaproteobacteria
TAA
Leu
>WENV183725422
PJQF01000006
73113
Gammaproteobacteria
TAA
Leu
>WENV183725717
PJQF01010218
176628
Gammaproteobacteria
GGG
Pro
>WENV183725524
PJQF01000492
184467
Gammaproteobacteria
TCT
Arg
>WENV183725450
PJQF01000052
281229
Gammaproteobacteria
GTT
Asn
>WENV183725467
PJQF01000081
281229
Gammaproteobacteria
GTT
Asn
>WENV183725419
PJQF01000002
29449
Gammaproteobacteria
CGA
Ser
>WENV183725438
PJQF01000015
29449
Gammaproteobacteria
CGA
Ser
>WENV183725420
PJQF01000002
480569
Gammaproteobacteria
CCC
Gly
>WENV183725687
PJQF01008076
401696
Gammaproteobacteria
TTG
Gln
>WENV183726113
PJQF01086820
481357
Gammaproteobacteria
GCA
Cys
>WENV183725899
PJQF01033259
400267
Gammaproteobacteria
CTG
Gln
>WENV183726267
PJQF01142384
2522
Gammaproteobacteria
>WENV183725441
PJQF01000023
176868
Gammaproteobacteria
CAT
Met
>WENV183726105
PJQF01085056
9062
Gammaproteobacteria
GCT
Ser
>WENV183725927
PJQF01039746
285918
Gammaproteobacteria
GTG
His
>WENV183725526
PJQF01000492
117929
Gammaproteobacteria
TAG
Leu
>WENV183725432
PJQF01000011
283441
Gammaproteobacteria
>WENV183725434
PJQF01000011
283441
Gammaproteobacteria
>WENV183725769
PJQF01014331
289050
Gammaproteobacteria
CCA
Trp
>WENV183725926
PJQF01039746
179440
Gammaproteobacteria
CCG
Arg
>WENV183725448
PJQF01000045
20296
Gammaproteobacteria
TGA
Ser
>WENV183725484
PJQF01000144
20296
Gammaproteobacteria
TGA
Ser
>WENV183725570
PJQF01001969
286016
Gammaproteobacteria
TTT
Lys
>WENV183725595
PJQF01003011
286016
Gammaproteobacteria
TTT
Lys
>WENV183725914
PJQF01037837
398941
Gammaproteobacteria
CTC
Glu
>WENV183725730
PJQF01011064
178305
Gammaproteobacteria
GGG
Pro
>WENV183725518
PJQF01000406
73161
Gammaproteobacteria
CAG
Leu
>WENV183725519
PJQF01000406
73161
Gammaproteobacteria
CAG
Leu
>WENV183725520
PJQF01000410
73161
Gammaproteobacteria
CAG
Leu
>WENV183725521
PJQF01000410
73161
Gammaproteobacteria
CAG
Leu
>WENV183726366
PJQF01174381
118322
Gammaproteobacteria
TAA
Leu
>WENV183725766
PJQF01014177
20472
Gammaproteobacteria
GCT
Ser
>WENV183725794
PJQF01017455
480368
Gammaproteobacteria
CCC
Gly
>WENV183725778
PJQF01015425
29777
Gammaproteobacteria
GGA
Ser
>WENV183725791
PJQF01017077
76278
Gammaproteobacteria
TAA
Leu
>WENV183725879
PJQF01029937
293662
Gammaproteobacteria
GGT
Thr
>WENV183726028
PJQF01062577
293662
Gammaproteobacteria
GGT
Thr
>WENV183725856
PJQF01026226
398939
Gammaproteobacteria
TAC
Val
>WENV183725731
PJQF01011092
74389
Gammaproteobacteria
CAG
Leu
>WENV183725461
PJQF01000072
117930
Gammaproteobacteria
CAA
Leu
>WENV183725557
PJQF01001276
117930
Gammaproteobacteria
CAA
Leu
>WENV183725698
PJQF01008649
119263
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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