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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183727686
PJTP01000091
205770
Gammaproteobacteria
ACG
Arg
>WENV183727687
PJTP01000091
205770
Gammaproteobacteria
ACG
Arg
>WENV183727688
PJTP01000091
205770
Gammaproteobacteria
ACG
Arg
>WENV183727689
PJTP01000091
205770
Gammaproteobacteria
ACG
Arg
>WENV183728037
PJTP01021253
205770
Gammaproteobacteria
ACG
Arg
>WENV183728038
PJTP01021253
205770
Gammaproteobacteria
ACG
Arg
>WENV183728039
PJTP01021253
205770
Gammaproteobacteria
ACG
Arg
>WENV183728166
PJTP01052915
205770
Gammaproteobacteria
ACG
Arg
>WENV183727663
PJTP01000068
117930
Gammaproteobacteria
CAA
Leu
>WENV183728007
PJTP01015500
117930
Gammaproteobacteria
CAA
Leu
>WENV183728178
PJTP01056497
73558
Gammaproteobacteria
CAG
Leu
>WENV183727751
PJTP01000147
301035
Gammaproteobacteria
CAT
Met
>WENV183727780
PJTP01000220
289050
Gammaproteobacteria
CCA
Trp
>WENV183728051
PJTP01024375
289050
Gammaproteobacteria
CCA
Trp
>WENV183728195
PJTP01061938
289050
Gammaproteobacteria
CCA
Trp
>WENV183727668
PJTP01000075
176627
Gammaproteobacteria
CCG
Arg
>WENV183727690
PJTP01000091
179074
Gammaproteobacteria
CCT
Arg
>WENV183727569
PJTP01000019
74718
Gammaproteobacteria
GAG
Leu
>WENV183727628
PJTP01000048
20472
Gammaproteobacteria
GCT
Ser
>WENV183727685
PJTP01000091
20472
Gammaproteobacteria
GCT
Ser
>WENV183728036
PJTP01021253
20472
Gammaproteobacteria
GCT
Ser
>WENV183727653
PJTP01000063
60942
Gammaproteobacteria
GGA
Ser
>WENV183727728
PJTP01000108
60942
Gammaproteobacteria
GGA
Ser
>WENV183727760
PJTP01000166
29777
Gammaproteobacteria
GGA
Ser
>WENV183728185
PJTP01058314
29777
Gammaproteobacteria
GGA
Ser
>WENV183727489
PJTP01000006
185120
Gammaproteobacteria
GGG
Pro
>WENV183727649
PJTP01000060
125291
Gammaproteobacteria
GTA
Tyr
>WENV183727664
PJTP01000070
118322
Gammaproteobacteria
TAA
Leu
>WENV183727542
PJTP01000015
118321
Gammaproteobacteria
TAG
Leu
>WENV183727670
PJTP01000077
58707
Gammaproteobacteria
TGA
Ser
>WENV183727666
PJTP01000071
319467
Gammaproteobacteria
TGT
Thr
>WENV183728001
PJTP01014882
319467
Gammaproteobacteria
TGT
Thr
>WENV183727544
PJTP01000015
422716
Gammaproteobacteria
TTG
Gln
>WENV183727757
PJTP01000151
422716
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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